Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 7.6e-56 220.3 115 100.0
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 9.6e-51 203.4 112 95.5
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 3.0e-36 155.2 115 72.2
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 4.8e-34 147.9 110 75.5
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.8e-33 146.0 101 71.3
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 4.0e-33 144.8 105 74.3
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 9.0e-33 143.7 104 74.0
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 2.6e-32 142.1 103 75.7
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 5.8e-32 141.0 112 73.2
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 7.6e-32 140.6 114 71.9
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.0e-31 140.2 111 69.4
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.0e-31 140.2 113 72.6
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.3e-31 139.8 111 69.4
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.3e-31 139.8 111 66.7
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 1.3e-31 139.8 110 67.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 2.9e-31 138.7 113 69.9
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 2.9e-31 138.7 111 65.8
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.8e-31 138.3 110 68.2
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 3.8e-31 138.3 108 67.6
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 4.9e-31 137.9 115 71.3
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 4.9e-31 137.9 114 71.1
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 4.9e-31 137.9 114 68.4
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.4e-30 136.3 122 64.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.2e-30 134.8 114 64.0
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 2.7e-29 132.1 120 62.5
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.7e-29 132.1 124 62.1
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 3.5e-29 131.7 113 69.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.0e-29 131.0 111 66.7
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 7.9e-29 130.6 116 63.8
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.0e-28 130.2 126 61.9
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.0e-28 130.2 126 61.9
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.3e-28 129.8 115 66.1
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.3e-28 129.0 116 67.2
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.3e-28 129.0 111 68.5
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.3e-28 129.0 95 71.6
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 3.0e-28 128.6 109 67.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.0e-28 128.6 113 62.8
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.1e-28 127.9 118 62.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 8.7e-28 127.1 91 74.7
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.5e-27 126.3 98 69.4
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.5e-27 126.3 107 68.2
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.1e-26 122.5 95 66.3
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 2.1e-26 122.5 124 62.1
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 4.8e-26 121.3 125 60.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 8.2e-26 120.6 114 60.5
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.4e-25 119.8 100 67.0
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.8e-25 119.4 116 57.8
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 1.8e-25 119.4 114 61.4
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.8e-25 119.4 110 59.1
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.4e-25 119.0 114 59.6
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 3.1e-25 118.6 106 63.2
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 9.0e-25 117.1 115 58.3
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.2e-24 116.7 114 59.6
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.2e-24 116.7 114 59.6
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.2e-24 116.7 112 58.9
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 1.5e-24 116.3 99 64.6
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 4.5e-24 114.8 105 62.9
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 5.9e-24 114.4 109 59.6
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 5.9e-24 114.4 97 66.0
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 3.8e-23 111.7 106 59.4
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 5.0e-23 111.3 112 57.1
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.4e-22 109.8 111 58.6
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.9e-22 109.4 116 62.1
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 7.2e-22 107.5 121 52.1
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 3.5e-21 105.1 116 59.5
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 3.5e-21 105.1 87 67.8
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.8e-20 102.8 115 53.9
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 3.9e-20 101.7 115 52.2
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 4.3e-19 98.2 107 53.3
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.6e-18 96.3 114 51.8
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 3.7e-18 95.1 107 52.3
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.8e-18 94.7 114 50.9
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 6.3e-18 94.4 104 57.7
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 3.1e-17 92.0 107 51.4
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 6.9e-17 90.9 107 50.5
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.6e-16 89.0 116 50.0
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.6e-16 89.0 107 51.4
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.5e-16 88.2 85 60.0
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 6.5e-15 84.3 107 49.5
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.5e-14 82.4 107 47.7
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 5.5e-14 81.3 136 44.1
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 9.4e-14 80.5 96 56.2
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.2e-13 80.1 136 43.4
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 1.6e-13 79.7 101 50.5
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 2.7e-13 79.0 115 44.3
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 2.7e-13 79.0 114 44.7
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 3.6e-13 78.6 103 48.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 6.1e-13 77.8 114 43.0
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.4e-12 76.6 114 47.4
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 1.4e-12 76.6 111 44.1
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.3e-12 75.9 110 46.4
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.1e-11 73.6 96 45.8
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.0e-11 72.8 97 45.4
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.8e-10 68.9 96 43.8
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.4e-09 66.6 114 40.4
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.1e-09 65.5 107 43.9
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 3.4e-08 62.0 96 42.7
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.9e-08 61.2 106 39.6
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 1.0e-07 60.5 54 63.0
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 1.7e-07 59.7 99 43.4
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 1.9e-06 56.2 45 62.2
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 2.5e-06 55.8 111 36.9
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 2.5e-06 55.8 111 36.9


User provided reference genes

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