Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 6.0e-89 330.9 174 100.0
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.7e-30 136.7 150 51.3
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 3.8e-27 125.6 174 48.3
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 1.9e-26 123.2 174 48.3
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 2.5e-26 122.9 174 48.3
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 2.5e-26 122.9 174 48.3
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 2.5e-26 122.9 163 49.1
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 5.5e-26 121.7 174 48.3
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 5.5e-26 121.7 174 48.3
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 5.5e-26 121.7 174 48.3
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 7.2e-26 121.3 174 48.3
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 9.5e-26 120.9 173 49.1
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 4.7e-25 118.6 163 48.5
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 6.1e-25 118.2 165 46.7
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.0e-24 117.5 163 47.2
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 1.0e-24 117.5 174 47.7
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 2.3e-24 116.3 163 47.9
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.3e-24 116.3 163 47.2
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 3.0e-24 115.9 174 44.3
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 3.0e-24 115.9 174 47.1
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 8.9e-24 114.4 167 44.9
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 8.9e-24 114.4 167 44.9
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 8.9e-24 114.4 163 47.2
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 1.2e-23 114.0 174 43.7
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 1.5e-23 113.6 163 46.6
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 1.5e-23 113.6 174 45.4
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.5e-23 113.6 163 46.6
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 2.0e-23 113.2 162 46.9
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 2.6e-23 112.8 159 47.2
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.6e-23 112.8 163 46.6
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 4.4e-23 112.1 163 48.5
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 4.4e-23 112.1 174 44.3
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 4.4e-23 112.1 174 44.3
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 7.5e-23 111.3 163 46.0
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 9.8e-23 110.9 174 43.7
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 9.8e-23 110.9 161 46.6
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 9.8e-23 110.9 167 43.7
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 1.3e-22 110.5 173 43.9
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 1.3e-22 110.5 163 45.4
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 1.3e-22 110.5 156 46.8
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 1.3e-22 110.5 170 44.7
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 1.7e-22 110.2 174 41.4
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 2.2e-22 109.8 167 44.3
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 2.8e-22 109.4 144 47.9
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 2.8e-22 109.4 154 44.8
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 2.8e-22 109.4 166 44.6
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 3.7e-22 109.0 163 44.8
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 3.7e-22 109.0 174 44.3
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 3.7e-22 109.0 163 46.6
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 3.7e-22 109.0 174 44.8
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 3.7e-22 109.0 167 43.1
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.9e-22 108.6 166 44.0
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 4.9e-22 108.6 137 49.6
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 8.3e-22 107.8 163 44.8
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.1e-21 107.5 174 44.8
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.1e-21 107.5 162 43.2
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 1.1e-21 107.5 162 43.2
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.4e-21 107.1 144 47.2
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.4e-21 107.1 166 44.6
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 1.8e-21 106.7 151 44.4
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 2.4e-21 106.3 174 43.1
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 2.4e-21 106.3 162 43.2
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 2.4e-21 106.3 145 45.5
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 2.4e-21 106.3 143 46.9
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 2.4e-21 106.3 146 45.2
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 3.1e-21 105.9 163 45.4
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 3.1e-21 105.9 166 43.4
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 4.1e-21 105.5 174 43.7
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 4.1e-21 105.5 162 43.8
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 5.4e-21 105.1 163 45.4
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 7.0e-21 104.8 145 44.1
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 7.0e-21 104.8 86 65.1
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 9.2e-21 104.4 154 42.9
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 9.2e-21 104.4 162 43.2
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 1.2e-20 104.0 174 43.1
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.2e-20 104.0 174 42.5
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 1.2e-20 104.0 145 43.4
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 1.6e-20 103.6 149 43.6
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 2.7e-20 102.8 165 43.0
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 2.7e-20 102.8 165 43.0
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 3.5e-20 102.4 174 42.0
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 3.5e-20 102.4 163 42.9
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 4.5e-20 102.1 162 44.4
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 4.5e-20 102.1 174 44.3
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 7.8e-20 101.3 155 43.9
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.0e-19 100.9 145 42.8
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 1.3e-19 100.5 162 42.6
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 2.3e-19 99.8 162 41.4
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.3e-19 99.8 162 45.1
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 2.3e-19 99.8 174 41.4
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 3.8e-19 99.0 85 63.5
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 3.8e-19 99.0 155 41.9
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.0e-19 98.6 177 40.1
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 5.0e-19 98.6 172 39.5
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 1.1e-18 97.4 169 40.2
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.3e-18 95.5 162 41.4
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 5.6e-18 95.1 162 40.7
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 1.2e-17 94.0 146 42.5
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 1.6e-17 93.6 167 38.9
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 3.6e-17 92.4 146 40.4
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 3.6e-17 92.4 163 41.1
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 8.0e-17 91.3 162 39.5
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 9.8e-15 84.3 174 37.4
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.3e-14 84.0 75 65.3
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.2e-14 83.2 177 36.2
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 1.4e-13 80.5 89 49.4
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 1.8e-13 80.1 141 40.4
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 7.0e-13 78.2 86 47.7
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.6e-12 77.0 160 36.9
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 2.7e-12 76.3 110 42.7
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 3.5e-12 75.9 111 42.3
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 4.6e-12 75.5 144 36.1
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 3.0e-11 72.8 111 41.4
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 5.0e-11 72.0 146 35.6
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 6.6e-11 71.6 143 36.4
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 6.6e-11 71.6 160 34.4
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 8.6e-11 71.2 114 39.5
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 1.9e-10 70.1 146 34.9
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 1.9e-10 70.1 146 34.9
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 2.5e-10 69.7 146 34.2
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 2.5e-10 69.7 146 34.2
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 5.6e-10 68.6 146 34.2
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 1.8e-08 63.5 115 40.9
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 8.9e-08 61.2 126 38.1
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 2.6e-07 59.7 109 38.5
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 4.4e-07 58.9 114 36.0
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 5.8e-07 58.5 160 29.4
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 2.2e-06 56.6 86 41.9
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 6.4e-06 55.1 124 33.1


User provided reference genes

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