Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 4.4e-83 311.2 156 100.0
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 3.2e-49 198.7 145 71.0
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 3.0e-47 192.2 146 67.1
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.9e-46 189.5 147 66.7
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 2.5e-46 189.1 146 65.1
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 4.3e-46 188.3 146 67.1
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 7.4e-46 187.6 145 66.2
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 6.9e-44 181.0 153 61.4
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 2.0e-43 179.5 153 61.4
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 4.5e-43 178.3 146 63.7
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 1.7e-42 176.4 144 63.2
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 4.2e-41 171.8 154 57.1
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 5.5e-41 171.4 154 55.8
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 9.3e-41 170.6 147 59.2
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 1.2e-40 170.2 147 57.1
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 3.5e-40 168.7 146 58.2
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 4.6e-40 168.3 147 61.2
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 8.7e-39 164.1 146 58.9
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 1.1e-38 163.7 146 58.9
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 2.5e-38 162.5 146 58.9
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 1.6e-37 159.8 146 58.9
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 2.2e-37 159.5 147 55.8
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 1.1e-36 157.1 145 55.2
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 1.8e-36 156.4 149 55.0
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 4.1e-36 155.2 149 56.4
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.2e-35 153.7 145 54.5
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 1.2e-35 153.7 146 52.7
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 2.0e-35 152.9 145 54.5
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 2.6e-35 152.5 146 52.7
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 3.4e-35 152.1 146 56.8
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 5.9e-35 151.4 146 56.8
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 7.7e-35 151.0 145 55.9
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.3e-34 150.2 154 52.6
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 2.9e-34 149.1 154 51.9
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 3.8e-34 148.7 146 53.4
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 3.8e-34 148.7 148 53.4
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 8.5e-34 147.5 146 50.0
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 8.5e-34 147.5 148 52.0
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 8.5e-34 147.5 148 52.0
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.4e-33 146.7 154 51.3
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.4e-33 146.7 146 52.1
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.5e-33 146.0 146 53.4
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 3.2e-33 145.6 145 54.5
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 1.2e-32 143.7 148 51.4
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.6e-32 143.3 145 53.1
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 2.1e-32 142.9 148 50.7
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 4.6e-32 141.7 146 54.8
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.4e-31 140.2 148 50.7
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 3.0e-31 139.0 148 48.6
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 3.9e-31 138.7 145 53.1
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 1.1e-30 137.1 145 52.4
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.5e-30 136.0 177 43.5
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 4.3e-30 135.2 145 51.7
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 7.4e-30 134.4 114 59.6
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 7.4e-30 134.4 148 48.6
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 1.7e-29 133.3 144 53.5
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 2.2e-29 132.9 144 53.5
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 2.8e-29 132.5 144 50.7
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 2.8e-29 132.5 144 53.5
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 3.7e-29 132.1 144 50.7
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 1.1e-28 130.6 145 53.1
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 1.4e-28 130.2 144 49.3
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 1.8e-28 129.8 155 41.9
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.8e-28 129.8 145 53.1
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 4.1e-28 128.6 148 43.2
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.5e-27 126.7 148 43.9
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 1.5e-27 126.7 146 47.9
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.5e-27 126.7 146 46.6
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 7.7e-27 124.4 146 46.6
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.0e-26 124.0 114 56.1
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 1.3e-26 123.6 148 41.9
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 2.2e-26 122.9 114 55.3
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 1.1e-25 120.6 149 46.3
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 2.5e-25 119.4 187 43.3
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 7.2e-25 117.9 147 44.2
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 3.6e-24 115.5 145 42.1
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 2.3e-23 112.8 148 43.9
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 3.9e-23 112.1 146 45.2
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 3.3e-22 109.0 182 36.8
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 3.3e-22 109.0 144 43.1
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 9.7e-22 107.5 144 47.9
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 9.7e-22 107.5 116 51.7
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 9.7e-22 107.5 134 44.8
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 2.2e-21 106.3 145 40.0
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 1.5e-19 100.1 145 39.3
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 5.9e-19 98.2 146 39.0
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 6.5e-18 94.7 148 39.9
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 6.5e-18 94.7 145 39.3
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 5.5e-17 91.7 144 35.4
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 9.4e-17 90.9 108 46.3
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 1.5e-14 83.6 72 54.2
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 4.8e-13 78.6 94 43.6
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 1.4e-12 77.0 67 53.7
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 3.8e-10 68.9 121 34.7
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 3.0e-07 59.3 75 50.7


User provided reference genes

Program Settings