Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 0.0e+00 1119.8 569 100.0
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.6e-229 798.9 463 83.6
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 5.3e-227 791.2 481 80.0
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 2.6e-226 788.9 459 83.0
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 4.2e-224 781.6 465 79.1
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 5.2e-222 774.6 464 80.0
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 6.7e-222 774.2 465 80.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.7e-222 774.2 464 79.7
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 8.8e-222 773.9 465 80.2
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.1e-221 773.5 466 80.0
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.0e-221 772.7 471 79.4
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 4.8e-220 768.1 462 78.8
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 1.1e-219 766.9 462 78.8
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 3.1e-219 765.4 464 78.9
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 7.0e-219 764.2 465 77.8
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.6e-218 763.1 465 77.8
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 2.0e-218 762.7 458 80.1
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.0e-217 760.4 465 79.4
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 2.2e-217 759.2 461 77.9
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 7.2e-216 754.2 465 77.0
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 1.6e-215 753.1 489 74.8
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 2.7e-215 752.3 463 78.2
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 8.0e-215 750.7 465 75.9
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 8.0e-215 750.7 473 75.3
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.8e-214 749.6 471 76.9
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 2.3e-214 749.2 464 77.6
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 3.0e-214 748.8 504 73.0
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 2.6e-213 745.7 470 76.2
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 7.5e-213 744.2 458 77.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 9.7e-213 743.8 471 75.6
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.7e-212 743.0 471 74.1
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.4e-211 740.0 466 76.4
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.1e-211 738.8 495 72.5
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 5.3e-211 738.0 466 75.5
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.6e-210 736.5 469 74.2
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.0e-210 736.1 458 75.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.7e-210 735.7 495 72.3
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 3.8e-209 731.9 458 75.3
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 6.5e-209 731.1 465 75.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 8.5e-209 730.7 498 72.1
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 3.2e-208 728.8 553 66.4
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 4.2e-208 728.4 502 72.1
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.1e-207 726.1 472 75.0
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 4.7e-207 724.9 471 72.8
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.8e-206 723.0 490 71.4
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.0e-206 722.2 465 72.9
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 4.0e-206 721.8 458 74.5
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 8.8e-206 720.7 471 72.6
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.2e-205 720.3 459 73.0
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.2e-204 716.1 472 72.9
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.8e-203 713.0 458 74.0
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.4e-198 696.8 538 64.7
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 1.4e-198 696.8 463 72.6
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.3e-193 680.2 471 71.8
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.8e-193 678.7 460 68.9
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 5.6e-192 674.9 499 65.7
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 8.3e-188 661.0 399 78.2
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.3e-188 661.0 386 82.6
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.0e-185 654.1 390 81.0
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.3e-185 653.7 471 68.8
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 8.6e-185 651.0 471 68.4
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.1e-184 650.6 402 76.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 2.8e-183 646.0 458 65.9
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 3.1e-182 642.5 459 65.8
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.5e-181 640.2 469 67.8
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-179 634.0 409 73.1
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.1e-179 634.0 409 73.1
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 7.0e-179 631.3 423 72.6
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.5e-178 629.0 457 63.2
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 6.6e-177 624.8 459 65.8
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 3.3e-176 622.5 469 66.5
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.1e-174 617.5 467 64.7
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.3e-169 600.5 387 73.4
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.9e-168 596.7 489 64.0
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.4e-166 589.7 361 78.7
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.3e-164 583.9 470 62.8
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 2.1e-159 566.6 327 82.6
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 6.2e-151 538.5 330 78.2
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.4e-150 536.6 365 70.7
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.4e-147 526.6 389 69.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 4.3e-120 436.0 280 76.1
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 2.2e-103 380.6 235 77.4
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 2.5e-75 287.3 172 79.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 2.8e-66 257.3 146 86.3
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.5e-64 251.5 447 32.7
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 9.9e-56 222.2 235 54.9
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.1e-49 202.2 159 66.0
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 3.2e-46 190.7 118 76.3
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.8e-33 148.3 428 29.2
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.9e-22 111.7 387 26.4
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 2.7e-21 107.8 405 27.2
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.5e-21 107.5 77 61.0
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 1.2e-16 92.4 351 24.2
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 1.0e-15 89.4 458 24.0
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.5e-14 84.7 57 70.2
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 5.7e-11 73.6 392 25.3
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 2.9e-07 61.2 63 46.0
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 5.0e-07 60.5 351 23.1
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 4.2e-06 57.4 148 30.4
Sc03g0005140 Simmondsia chinensis HOM05D007497 ORTHO05D009706 4.2e-06 57.4 57 52.6


User provided reference genes

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