Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 5.6e-33 143.7 72 100.0
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.4e-15 85.9 75 66.7
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.7e-14 80.1 78 59.0
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 7.7e-14 80.1 78 59.0
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.0e-13 79.7 76 61.8
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 1.3e-13 79.3 69 65.2
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.0e-13 77.4 77 59.7
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.4e-12 75.9 72 58.3
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 2.5e-12 75.1 77 63.6
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 2.5e-12 75.1 78 53.8
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 7.2e-12 73.6 74 54.1
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 2.1e-11 72.0 72 55.6
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.1e-11 72.0 73 57.5
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 2.3e-10 68.6 75 56.0
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 3.0e-10 68.2 70 54.3
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 3.0e-10 68.2 74 54.1
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.9e-10 67.8 73 56.2
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 3.9e-10 67.8 73 56.2
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.7e-10 67.0 78 53.8
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 8.8e-10 66.6 78 55.1
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 8.8e-10 66.6 78 52.6
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 1.1e-09 66.2 75 53.3
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.5e-09 65.9 71 52.1
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 1.5e-09 65.9 68 55.9
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 2.0e-09 65.5 68 55.9
COL.COLO4_32149 Corchorus olitorius HOM05D008114 ORTHO05D010089 2.0e-09 65.5 68 58.8
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.5e-09 65.1 68 54.4
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.3e-09 64.7 77 48.1
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.3e-09 64.7 77 48.1
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 5.7e-09 63.9 78 52.6
Aa31LG4G11900 Aethionema arabicum HOM05D013984 ORTHO05D010089 9.7e-09 63.2 65 58.5
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.3e-08 62.8 68 51.5
FAN17G1195 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.2e-08 62.0 68 50.0
FAN22G0519 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.2e-08 62.0 68 50.0
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 2.8e-08 61.6 70 52.9
CsaV3_5G034590 Cucumis sativus L. HOM05D022275 ORTHO05D010089 3.7e-08 61.2 63 54.0
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 3.7e-08 61.2 69 53.6
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 3.7e-08 61.2 69 53.6
THA.LOC104809237 Tarenaya hassleriana HOM05D013984 ORTHO05D010089 3.7e-08 61.2 61 55.7
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 4.8e-08 60.8 74 51.4
RcHm_v2.0_Chr4g0434421 Rosa chinensis HOM05D008114 ORTHO05D010089 4.8e-08 60.8 67 50.7
Sed0006257 Sechium edule HOM05D022275 ORTHO05D010089 4.8e-08 60.8 67 43.3
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 8.2e-08 60.1 72 51.4
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.1e-07 59.7 59 55.9
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.4e-07 58.5 70 52.9
FAN07G1623 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.4e-07 58.5 68 48.5
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 2.4e-07 58.5 72 50.0
FAN12G0147 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.1e-07 58.2 68 48.5
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 4.1e-07 57.8 71 47.9
Cc11_g09680 Coffea canephora HOM05D008114 ORTHO05D010089 5.3e-07 57.4 62 50.0
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.9e-07 57.0 81 48.1
Migut.E00368 Erythranthe guttata HOM05D008114 ORTHO05D010089 9.1e-07 56.6 72 47.2
Gohir.D12G146500 Gossypium hirsutum HOM05D008114 ORTHO05D010089 9.1e-07 56.6 55 58.2
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.2e-06 56.2 74 47.3
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.2e-06 56.2 70 48.6
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 1.2e-06 56.2 67 50.7
MELO3C012274.2 Cucumis melo HOM05D022275 ORTHO05D010089 1.5e-06 55.8 63 50.8
Ah.02g127710 Amaranthus hybridus HOM05D008114 ORTHO05D010089 2.6e-06 55.1 61 45.9
Gorai.008G157800 Gossypium raimondii HOM05D008114 ORTHO05D010089 3.4e-06 54.7 55 54.5
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 3.4e-06 54.7 47 61.7
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 5.9e-06 53.9 68 47.1


User provided reference genes

Program Settings