Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 2.0e-62 242.3 125 100.0
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 1.1e-47 193.4 124 80.6
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 2.4e-47 192.2 124 80.6
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 2.4e-47 192.2 124 80.6
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.0e-47 190.7 124 79.0
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 9.1e-47 190.3 124 79.0
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 9.1e-47 190.3 124 79.0
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.2e-46 189.9 124 76.6
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 1.6e-46 189.5 124 79.8
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 2.0e-46 189.1 124 77.4
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 3.5e-46 188.3 124 78.2
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.0e-45 186.8 124 78.2
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.0e-45 186.8 124 78.2
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.0e-45 186.8 124 77.4
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.8e-45 184.9 124 76.6
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 3.8e-45 184.9 124 76.6
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.8e-45 184.9 124 77.4
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 6.5e-45 184.1 127 77.2
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 6.5e-45 184.1 124 76.6
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 6.5e-45 184.1 124 79.0
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 6.5e-45 184.1 124 79.0
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.1e-44 183.3 124 75.8
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 1.9e-44 182.6 124 75.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.5e-44 182.2 124 77.4
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.5e-44 182.2 124 75.0
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 2.5e-44 182.2 124 75.0
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 3.2e-44 181.8 124 77.4
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 3.2e-44 181.8 124 75.0
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 4.2e-44 181.4 124 76.6
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 7.2e-44 180.6 124 75.0
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 7.2e-44 180.6 124 75.0
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 7.2e-44 180.6 124 76.6
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.7e-43 178.7 124 73.4
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.6e-43 178.3 124 72.6
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 3.6e-43 178.3 124 74.2
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.7e-43 177.9 124 75.0
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 4.7e-43 177.9 124 75.0
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.1e-43 177.6 124 73.4
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 8.0e-43 177.2 124 74.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.0e-42 176.8 124 71.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.0e-42 176.8 123 74.0
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.4e-42 176.4 124 73.4
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.4e-42 176.4 124 73.4
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.8e-42 176.0 135 71.1
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.0e-42 175.3 123 74.8
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.0e-42 175.3 123 75.6
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 4.0e-42 174.9 123 73.2
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 5.2e-42 174.5 124 71.0
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 6.8e-42 174.1 123 74.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 6.8e-42 174.1 124 74.2
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 8.8e-42 173.7 124 71.8
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 1.2e-41 173.3 124 72.6
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.0e-41 172.6 124 75.8
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.6e-41 172.2 124 73.4
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.6e-41 172.2 124 75.0
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 3.4e-41 171.8 123 71.5
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.4e-41 171.4 124 71.0
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 4.4e-41 171.4 124 71.0
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 7.5e-41 170.6 124 71.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 9.8e-41 170.2 124 71.0
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.3e-40 169.9 124 70.2
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 2.2e-40 169.1 130 70.0
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.2e-40 169.1 124 70.2
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.7e-40 168.3 124 71.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 6.3e-40 167.5 124 69.4
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.1e-39 166.8 124 73.4
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 1.1e-39 166.8 124 69.4
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.4e-39 166.4 124 72.6
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.1e-39 164.9 124 72.6
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 4.1e-39 164.9 124 66.9
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 9.1e-39 163.7 138 63.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.7e-38 162.2 124 71.8
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 2.7e-38 162.2 124 67.7
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.7e-38 162.2 124 66.1
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 5.9e-38 161.0 124 64.5
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 5.9e-38 161.0 124 70.2
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 7.7e-38 160.6 124 65.3
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 1.0e-37 160.2 124 66.1
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.3e-37 159.1 124 72.6
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.9e-37 158.7 124 64.5
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 3.8e-37 158.3 124 65.3
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 3.8e-37 158.3 123 66.7
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 6.5e-37 157.5 124 64.5
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 8.6e-37 157.1 124 66.9
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.5e-36 156.4 124 68.5
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 3.3e-36 155.2 124 64.5
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 3.3e-36 155.2 124 64.5
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 3.3e-36 155.2 124 64.5
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 4.2e-36 154.8 124 66.1
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 9.5e-36 153.7 124 65.3
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 1.2e-35 153.3 124 62.9
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 1.4e-34 149.8 131 61.8
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.8e-34 149.4 124 66.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.3e-34 149.1 124 64.5
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 2.3e-34 149.1 139 60.4
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 3.0e-34 148.7 141 57.4
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 4.0e-34 148.3 124 62.1
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 5.2e-34 147.9 124 63.7
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 5.2e-34 147.9 124 65.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 6.8e-34 147.5 124 63.7
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.2e-33 146.7 150 54.7
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.6e-33 145.6 140 54.3
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 1.3e-32 143.3 118 63.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 6.3e-32 141.0 132 58.3
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.5e-28 129.8 78 82.1
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.6e-27 126.3 121 57.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 2.8e-27 125.6 118 55.9
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 2.8e-27 125.6 120 56.7
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.3e-26 122.5 119 52.1
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.0e-25 119.4 114 57.0
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 2.7e-22 109.0 146 51.4
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 4.6e-22 108.2 119 56.3
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.1e-20 103.6 125 52.8
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 4.0e-18 95.1 112 44.6
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 1.2e-17 93.6 53 88.7
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 1.2e-17 93.6 56 85.7
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 9.2e-15 84.0 80 50.0
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 8.6e-13 77.4 128 40.6
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.4e-07 60.1 133 33.1
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 7.8e-06 54.3 36 69.4
VMungo0720G2142 Vigna mungo HOM05D008589 ORTHO05D010715 7.8e-06 54.3 71 45.1


User provided reference genes

Program Settings