Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2247 Acer truncatum HOM05D037071 ORTHO05D010002 9.2e-87 323.6 166 100.0
Atru.chr3.79 Acer truncatum HOM05D037071 ORTHO05D010002 2.7e-78 295.4 154 98.1
Atru.chr4.2973 Acer truncatum HOM05D000160 ORTHO05D010002 4.3e-28 128.6 144 45.1
Atru.chr12.219 Acer truncatum HOM05D000160 ORTHO05D010002 2.6e-25 119.4 140 47.1
Ciclev10029403m.g Citrus clementina HOM05D037071 ORTHO05D010002 1.1e-23 114.0 137 45.3
Ciclev10029411m.g Citrus clementina HOM05D000160 ORTHO05D010002 1.4e-23 113.6 137 45.3
Ciclev10029096m.g Citrus clementina HOM05D000160 ORTHO05D010002 3.7e-19 99.0 138 41.3
Atru.chr7.1493 Acer truncatum HOM05D000160 ORTHO05D010002 1.3e-11 73.9 91 48.4
FAN05G3604 Fragaria x ananassa HOM05D000160 ORTHO05D010002 4.1e-10 68.9 125 35.2
Dinv40348 Davidia involucrata HOM05D000160 ORTHO05D010002 6.9e-10 68.2 116 39.7
FAN01G1203 Fragaria x ananassa HOM05D000160 ORTHO05D010002 6.9e-10 68.2 121 34.7
FAN06G0552 Fragaria x ananassa HOM05D000160 ORTHO05D010002 9.1e-10 67.8 134 33.6
FAN06G1926 Fragaria x ananassa HOM05D000160 ORTHO05D010002 9.1e-10 67.8 108 38.9
FvH4_7g03580 Fragaria vesca HOM05D000160 ORTHO05D010002 1.2e-09 67.4 125 34.4
FAN10G1295 Fragaria x ananassa HOM05D000160 ORTHO05D010002 1.2e-09 67.4 120 36.7
Dinv22339 Davidia involucrata HOM05D000160 ORTHO05D010002 1.5e-09 67.0 110 37.3
MD07G1047000 Malus domestica HOM05D000160 ORTHO05D010002 1.5e-09 67.0 120 38.3
TAR624G0515 Trochodendron aralioides HOM05D000160 ORTHO05D010002 1.5e-09 67.0 121 35.5
Dinv40345 Davidia involucrata HOM05D000160 ORTHO05D010002 2.0e-09 66.6 114 37.7
FAN10G2194 Fragaria x ananassa HOM05D000160 ORTHO05D010002 2.0e-09 66.6 120 36.7
FAN10G2314 Fragaria x ananassa HOM05D000160 ORTHO05D010002 2.0e-09 66.6 120 36.7
Dinv40347 Davidia involucrata HOM05D000160 ORTHO05D010002 2.6e-09 66.2 115 39.1
Dinv22334 Davidia involucrata HOM05D000160 ORTHO05D010002 3.4e-09 65.9 111 35.1
FAN03G1137 Fragaria x ananassa HOM05D000160 ORTHO05D010002 3.4e-09 65.9 120 35.0
FvH4_7g03920 Fragaria vesca HOM05D000160 ORTHO05D010002 4.5e-09 65.5 134 32.8
Prupe.2G041600 Prunus persica HOM05D000160 ORTHO05D010002 5.9e-09 65.1 131 33.6
Cpa.g.sc51.127 Carica papaya HOM05D000160 ORTHO05D016620 7.7e-09 64.7 123 35.8
Nn3g20308 Nelumbo nucifera HOM05D000160 ORTHO05D010002 7.7e-09 64.7 116 38.8
Nn3g20316 Nelumbo nucifera HOM05D000160 ORTHO05D010002 7.7e-09 64.7 116 38.8
FvH4_1g06750 Fragaria vesca HOM05D000160 ORTHO05D010002 1.7e-08 63.5 106 38.7
FAN19G2611 Fragaria x ananassa HOM05D000160 ORTHO05D010002 1.7e-08 63.5 106 38.7
Nn3g20987 Nelumbo nucifera HOM05D000160 ORTHO05D010002 1.7e-08 63.5 116 38.8
FAN28G2622 Fragaria x ananassa HOM05D000160 ORTHO05D010002 3.8e-08 62.4 112 39.3
Cpa.g.sc52.29 Carica papaya HOM05D000160 ORTHO05D010002 5.0e-08 62.0 106 34.0
Prupe.2G041700 Prunus persica HOM05D000160 ORTHO05D010002 1.1e-07 60.8 128 35.2
FAN23G0277 Fragaria x ananassa HOM05D000160 ORTHO05D010002 1.4e-07 60.5 112 38.4
FAN26G1036 Fragaria x ananassa HOM05D000160 ORTHO05D010002 1.4e-07 60.5 112 38.4
FAN26G2923 Fragaria x ananassa HOM05D000160 ORTHO05D010002 1.4e-07 60.5 112 38.4
PSO063G3356 Papaver somniferum HOM05D000160 ORTHO05D010002 1.2e-06 57.4 120 34.2
Thecc.09G073300 Theobroma cacao HOM05D000160 ORTHO05D010002 1.6e-06 57.0 116 33.6
CARHR034680 Cardamine hirsuta HOM05D000160 ORTHO05D000496 3.6e-06 55.8 123 34.1
MBI11_g41397_MAGBIO Magnolia biondii HOM05D000160 ORTHO05D010002 3.6e-06 55.8 104 36.5
Sc25g0000820 Simmondsia chinensis HOM05D000160 ORTHO05D000496 4.7e-06 55.5 120 32.5
Thecc.04G209000 Theobroma cacao HOM05D000160 ORTHO05D010002 4.7e-06 55.5 126 32.5
Thecc.04G209200 Theobroma cacao HOM05D000160 ORTHO05D010002 4.7e-06 55.5 126 32.5
Thecc.04G209300 Theobroma cacao HOM05D000160 ORTHO05D010002 4.7e-06 55.5 126 32.5
Lsat_1_v5_gn_5_121781 Lactuca sativa HOM05D000160 ORTHO05D000496 7.9e-06 54.7 120 29.2
Os03g0837700 Oryza sativa ssp. japonica HOM05D000160 ORTHO05D010002 7.9e-06 54.7 122 32.8
Thecc.02G294200 Theobroma cacao HOM05D000160 ORTHO05D010002 7.9e-06 54.7 120 35.0


User provided reference genes

Program Settings