Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 2.6e-272 941.4 468 100.0
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.9e-214 749.2 462 79.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.3e-212 742.3 460 78.0
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.6e-208 729.6 460 77.8
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 7.8e-208 727.2 460 77.6
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 2.9e-207 725.3 464 76.3
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.1e-206 723.4 460 76.7
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 3.3e-206 721.8 461 75.7
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 8.3e-202 707.2 459 74.3
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 4.1e-201 704.9 460 75.0
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.0e-200 702.6 529 68.4
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 3.5e-200 701.8 463 74.1
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.0e-199 698.7 448 77.5
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 4.3e-198 694.9 459 73.9
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 7.3e-198 694.1 459 73.9
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 7.3e-198 694.1 463 73.9
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.1e-197 692.6 462 72.5
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 2.8e-197 692.2 460 72.8
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 8.0e-197 690.6 461 73.5
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 2.3e-196 689.1 460 72.8
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.2e-194 682.6 447 74.3
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 8.3e-194 680.6 465 71.6
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 9.2e-193 677.2 454 72.5
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.6e-192 676.4 455 73.8
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 5.1e-191 671.4 457 72.2
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 9.5e-190 667.2 510 67.1
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.2e-189 666.8 462 72.7
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 4.0e-188 661.8 449 74.4
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 5.2e-188 661.4 461 72.0
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.6e-187 659.1 449 73.5
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 2.9e-186 655.6 455 69.5
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 3.7e-186 655.2 460 69.8
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 3.7e-186 655.2 460 69.8
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 6.4e-186 654.4 460 71.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 9.2e-185 650.6 476 67.9
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.6e-184 649.8 456 68.9
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.1e-184 649.4 462 69.9
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.5e-184 648.7 465 69.0
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.7e-183 646.4 558 61.1
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.5e-182 643.3 461 69.0
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 5.6e-182 641.3 452 69.0
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 1.2e-181 640.2 460 68.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 1.4e-180 636.7 460 65.4
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.8e-180 636.3 453 67.8
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 4.0e-180 635.2 438 70.1
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 2.0e-179 632.9 460 68.3
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.2e-176 623.6 460 64.1
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 7.8e-176 620.9 458 66.6
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 5.1e-175 618.2 456 64.7
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.9e-174 616.3 461 65.5
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 3.3e-174 615.5 456 63.6
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 4.3e-174 615.1 460 66.5
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 1.3e-173 613.6 435 66.9
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 1.6e-173 613.2 457 63.9
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 3.1e-172 609.0 445 66.1
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 9.0e-172 607.4 457 62.8
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 7.6e-171 604.4 445 65.8
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.3e-170 603.6 467 64.5
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 6.4e-170 601.3 431 70.5
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.4e-169 600.1 456 62.5
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 7.1e-169 597.8 423 66.4
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.6e-168 596.7 447 64.4
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 3.9e-167 592.0 450 62.7
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 5.1e-167 591.7 454 62.8
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.6e-167 591.3 392 74.0
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 6.6e-167 591.3 461 62.3
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.1e-166 590.5 470 62.8
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.4e-164 583.6 462 61.9
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-164 583.2 451 62.7
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.8e-164 583.2 451 62.7
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.5e-163 580.1 450 61.6
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 3.4e-163 578.9 450 61.8
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 4.5e-163 578.6 453 60.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 7.6e-163 577.8 450 61.6
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 7.6e-163 577.8 453 60.3
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.3e-162 577.0 454 61.7
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 1.7e-162 576.6 453 60.5
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 1.7e-162 576.6 453 60.5
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-162 575.1 454 61.0
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 8.4e-162 574.3 453 60.5
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 2.4e-161 572.8 437 66.6
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 2.7e-160 569.3 424 64.2
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 3.5e-160 568.9 467 64.9
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 2.3e-159 566.2 454 59.7
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 5.6e-158 561.6 390 70.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.1e-156 557.4 466 59.0
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 5.5e-153 545.0 369 70.2
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.7e-152 542.7 395 66.1
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 1.4e-145 520.4 391 64.5
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 2.5e-145 519.6 466 56.9
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 5.7e-142 508.4 393 62.1
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 1.8e-140 503.4 473 60.3
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 6.9e-132 474.9 457 54.5
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 7.2e-129 464.9 334 67.1
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.1e-126 457.6 308 68.2
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 1.2e-120 437.6 302 71.2
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 8.8e-119 431.4 309 66.7
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 1.8e-116 423.7 399 52.9
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.9e-101 372.5 308 62.0
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 3.6e-96 356.3 262 69.8
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 3.6e-96 356.3 262 69.8
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.8e-87 327.4 453 41.9
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 5.4e-76 289.3 398 42.2
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 1.1e-71 275.0 184 72.3
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 5.8e-70 269.2 209 64.1
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 8.9e-63 245.4 215 59.1
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.0e-39 166.8 113 72.6
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 5.9e-30 136.3 103 64.1
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 7.7e-14 82.8 65 56.9
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.9e-13 80.9 65 55.4
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 7.9e-11 72.8 77 45.5


User provided reference genes

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