Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.194 Acer truncatum HOM05D008908 ORTHO05D010362 6.4e-152 540.8 289 100.0
Atru.chr11.186 Acer truncatum HOM05D000260 ORTHO05D000318 3.1e-74 282.7 251 60.6
Atru.chr11.207 Acer truncatum HOM05D000260 ORTHO05D000318 5.0e-72 275.4 250 56.0
Atru.chr11.185 Acer truncatum HOM05D008908 ORTHO05D010362 1.3e-64 250.8 250 55.2
Atru.chr11.210 Acer truncatum HOM05D000260 ORTHO05D000318 3.4e-60 236.1 291 45.4
Atru.chr11.198 Acer truncatum HOM05D008908 ORTHO05D010362 2.7e-54 216.5 294 42.2
Atru.chr11.195 Acer truncatum HOM05D008908 ORTHO05D010362 1.7e-51 207.2 292 50.3
Atru.chr11.211 Acer truncatum HOM05D008908 ORTHO05D010362 5.8e-36 155.6 99 76.8
Ciclev10014492m.g Citrus clementina HOM05D000260 ORTHO05D000318 3.9e-32 142.9 250 37.2
Ciclev10014868m.g Citrus clementina HOM05D000072 ORTHO05D000026 3.3e-31 139.8 238 38.2
Ciclev10014945m.g Citrus clementina HOM05D000072 ORTHO05D000026 7.3e-31 138.7 249 37.8
Atru.chr11.208 Acer truncatum HOM05D008908 ORTHO05D010362 1.6e-30 137.5 226 38.1
Ciclev10014231m.g Citrus clementina HOM05D000072 ORTHO05D000026 2.1e-30 137.1 235 36.6
Ciclev10016350m.g Citrus clementina HOM05D008908 ORTHO05D010362 8.3e-27 125.2 255 36.1
Atru.chr11.204 Acer truncatum HOM05D000260 ORTHO05D000318 9.2e-26 121.7 244 34.4
GSVIVG01011850001 Vitis vinifera HOM05D000260 ORTHO05D000318 7.3e-23 112.1 257 35.0
Haze_00644 Corylus avellana HOM05D000260 ORTHO05D000318 4.7e-22 109.4 261 34.5
QL01p040218 Quercus lobata HOM05D000260 ORTHO05D000318 6.2e-22 109.0 257 33.5
Dinv16122 Davidia involucrata HOM05D000260 ORTHO05D010362 8.1e-22 108.6 250 34.8
QL05p056320 Quercus lobata HOM05D000072 ORTHO05D000026 2.3e-21 107.1 256 31.6
Dinv31610 Davidia involucrata HOM05D000260 ORTHO05D010362 3.7e-19 99.8 256 32.4
CAN.G610.37 Capsicum annuum HOM05D000260 ORTHO05D000318 9.2e-18 95.1 253 32.0
Dinv31612 Davidia involucrata HOM05D016466 ORTHO05D010362 2.7e-17 93.6 241 35.3
PGSC0003DMG400012083 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.5e-17 93.2 216 28.2
Thecc.02G224000 Theobroma cacao HOM05D016466 ORTHO05D010362 7.8e-17 92.0 248 29.8
Migut.L01035 Erythranthe guttata HOM05D000260 ORTHO05D000318 1.0e-16 91.7 222 31.5
PGSC0003DMG402030532 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.7e-16 90.9 256 28.5
Nitab4.5_0002112g0030 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.3e-16 90.5 260 28.5
Peaxi162Scf00179g00219 Petunia axillaris HOM05D000260 ORTHO05D000318 2.3e-16 90.5 249 31.3
Sed0026459 Sechium edule HOM05D000260 ORTHO05D000318 2.3e-16 90.5 248 30.6
Sopen05g004780 Solanum pennellii HOM05D000072 ORTHO05D000026 3.9e-16 89.7 258 26.7
CANSAT01G0046 Cannabis sativa HOM05D000260 ORTHO05D000318 8.6e-16 88.6 251 28.3
PGSC0003DMG400030533 Solanum tuberosum HOM05D000260 ORTHO05D000318 8.6e-16 88.6 258 26.0
Dinv31605 Davidia involucrata HOM05D008908 ORTHO05D010362 3.3e-15 86.7 253 34.4
PGSC0003DMG400014063 Solanum tuberosum HOM05D008908 ORTHO05D010362 4.3e-15 86.3 248 28.2
CAN.G610.42 Capsicum annuum HOM05D000072 ORTHO05D000026 9.6e-15 85.1 254 27.2
Lj3P880T62 Lonicera japonica HOM05D016466 ORTHO05D010362 9.6e-15 85.1 240 29.6
Solyc05g009090.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 9.6e-15 85.1 252 31.7
PGSC0003DMG401030532 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.6e-14 84.3 253 27.3
Nitab4.5_0005528g0060 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.1e-14 84.0 221 28.5
CAN.G610.35 Capsicum annuum HOM05D000260 ORTHO05D000318 2.8e-14 83.6 252 29.8
Nitab4.5_0000057g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 3.6e-14 83.2 260 31.2
FAN12G1998 Fragaria x ananassa HOM05D000072 ORTHO05D000026 4.7e-14 82.8 249 30.1
Dinv31606 Davidia involucrata HOM05D000260 ORTHO05D000318 1.1e-13 81.6 254 32.7
Aqoxy3G00215 Aquilegia oxysepala HOM05D000260 ORTHO05D000318 1.4e-13 81.3 242 29.3
Peaxi162Scf00047g01420 Petunia axillaris HOM05D000072 ORTHO05D000026 1.4e-13 81.3 258 32.2
FAN12G0680 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.4e-13 80.5 253 31.2
Sopen05g004710 Solanum pennellii HOM05D000260 ORTHO05D000318 2.4e-13 80.5 234 26.1
PGSC0003DMG400006000 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.4e-13 80.5 225 30.2
PGSC0003DMG400014577 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.1e-13 80.1 252 31.3
Solyc05g008980.2 Solanum lycopersicum HOM05D000260 ORTHO05D000318 4.0e-13 79.7 256 29.3
Peaxi162Scf00564g00519 Petunia axillaris HOM05D000260 ORTHO05D000318 5.2e-13 79.3 259 27.4
Nitab4.5_0000057g0070 Nicotiana tabacum HOM05D000260 ORTHO05D000318 6.8e-13 79.0 259 29.7
FvH4_4g26841 Fragaria vesca HOM05D000260 ORTHO05D000318 8.9e-13 78.6 252 30.2
QL05p057061 Quercus lobata HOM05D046585 ORTHO05D026090 8.9e-13 78.6 141 36.2
ClCG05G022530 Citrullus lanatus HOM05D000260 ORTHO05D000318 1.2e-12 78.2 220 29.1
Nitab4.5_0004981g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.2e-12 78.2 233 32.2
CSS0009234 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 2.0e-12 77.4 216 28.7
CSS0018926 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 2.0e-12 77.4 216 28.7
FvH4_4g26890 Fragaria vesca HOM05D000072 ORTHO05D000026 2.0e-12 77.4 249 28.1
FAN07G2609 Fragaria x ananassa HOM05D000072 ORTHO05D022715 2.0e-12 77.4 247 27.9
QL05p056844 Quercus lobata HOM05D000260 ORTHO05D010362 2.0e-12 77.4 129 37.2
SalBow8G3654 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.6e-12 77.0 214 29.0
FAN12G2395 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.4e-12 76.6 259 30.5
FAN17G3025 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.4e-12 76.6 252 31.0
FvH4_4g26940 Fragaria vesca HOM05D000072 ORTHO05D000026 4.4e-12 76.3 259 30.5
SGA_v2.0_scaffold36G14559 Striga asiatica HOM05D008908 ORTHO05D010362 4.4e-12 76.3 252 28.2
CAN.G610.53 Capsicum annuum HOM05D000072 ORTHO05D000026 5.8e-12 75.9 258 31.0
FAN17G2553 Fragaria x ananassa HOM05D000072 ORTHO05D000026 5.8e-12 75.9 238 29.4
FAN22G0230 Fragaria x ananassa HOM05D000260 ORTHO05D000318 5.8e-12 75.9 244 28.7
SalBow8G0014 Salvia bowleyana HOM05D000260 ORTHO05D000318 5.8e-12 75.9 248 29.4
FAN07G2859 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.6e-12 75.5 260 27.3
SalBow8G0723 Salvia bowleyana HOM05D008908 ORTHO05D010362 7.6e-12 75.5 220 30.0
SalBow8G5024 Salvia bowleyana HOM05D008908 ORTHO05D010362 7.6e-12 75.5 218 28.9
SalBow8G5443 Salvia bowleyana HOM05D008908 ORTHO05D010362 7.6e-12 75.5 215 28.8
Sopen05g004700 Solanum pennellii HOM05D000260 ORTHO05D000318 7.6e-12 75.5 227 31.3
CSS0000188 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 9.9e-12 75.1 246 27.2
CSS0034234 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 9.9e-12 75.1 222 28.4
CSS0044393 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 9.9e-12 75.1 246 27.2
Ca_11131_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 9.9e-12 75.1 219 30.1
Migut.L01038 Erythranthe guttata HOM05D000072 ORTHO05D000026 9.9e-12 75.1 232 29.7
Nitab4.5_0014879g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 9.9e-12 75.1 234 32.9
SalBow8G0389 Salvia bowleyana HOM05D008908 ORTHO05D010362 9.9e-12 75.1 215 28.8
Solyc05g008940.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 9.9e-12 75.1 219 29.2
Potri.010G121025 Populus trichocarpa HOM05D008908 ORTHO05D010362 1.3e-11 74.7 231 31.2
SalBow8G1428 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.3e-11 74.7 212 26.9
CsaV3_5G034530 Cucumis sativus L. HOM05D000260 ORTHO05D000318 1.7e-11 74.3 251 28.7
Nitab4.5_0005528g0080 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.7e-11 74.3 228 29.8
FAN12G0737 Fragaria x ananassa HOM05D000260 ORTHO05D022715 2.2e-11 73.9 249 29.3
SalBow8G3049 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.2e-11 73.9 228 27.6
PGSC0003DMG400001271 Solanum tuberosum HOM05D000072 ORTHO05D000026 2.2e-11 73.9 251 26.3
Migut.L01037 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.9e-11 73.6 258 29.1
Nitab4.5_0001616g0130 Nicotiana tabacum HOM05D000072 ORTHO05D000026 3.8e-11 73.2 222 27.9
CsaV3_5G034550 Cucumis sativus L. HOM05D000072 ORTHO05D000026 4.9e-11 72.8 243 28.8
FAN12G0686 Fragaria x ananassa HOM05D000260 ORTHO05D000318 4.9e-11 72.8 249 30.1
Peaxi162Scf00179g00126 Petunia axillaris HOM05D000072 ORTHO05D000026 4.9e-11 72.8 245 30.6
Psat6g225240 Pisum sativum HOM05D000260 ORTHO05D000318 4.9e-11 72.8 239 27.2
SalBow8G5092 Salvia bowleyana HOM05D008908 ORTHO05D010362 4.9e-11 72.8 209 25.8
Sopen05g004740 Solanum pennellii HOM05D000260 ORTHO05D000318 4.9e-11 72.8 264 26.9
PGSC0003DMG402014059 Solanum tuberosum HOM05D008908 ORTHO05D010362 4.9e-11 72.8 232 28.9
FvH4_4g26892 Fragaria vesca HOM05D000072 ORTHO05D000026 8.4e-11 72.0 248 30.2
SalBow8G3380 Salvia bowleyana HOM05D000260 ORTHO05D000318 8.4e-11 72.0 246 28.5
Solyc04g007390.4 Solanum lycopersicum HOM05D000260 ORTHO05D000318 8.4e-11 72.0 225 28.4
Nitab4.5_0000694g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.1e-10 71.6 222 31.5
Solyc05g008990.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 1.1e-10 71.6 261 25.3
Sopen05g004750 Solanum pennellii HOM05D000260 ORTHO05D000318 1.1e-10 71.6 219 27.4
Actinidia16679 Actinidia chinensis HOM05D000260 ORTHO05D000318 1.4e-10 71.2 251 28.3
SalBow8G2767 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.4e-10 71.2 209 25.8
CSS0009724 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.9e-10 70.9 258 25.6
MBI09_g03812_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 1.9e-10 70.9 256 30.9
Peaxi162Scf00179g00316 Petunia axillaris HOM05D000260 ORTHO05D000318 2.4e-10 70.5 251 25.1
Sopen04g002450 Solanum pennellii HOM05D000260 ORTHO05D000318 2.4e-10 70.5 225 28.4
MBI09_g25174_MAGBIO Magnolia biondii HOM05D000072 ORTHO05D000026 3.2e-10 70.1 229 27.5
Manes.14G105800 Manihot esculenta HOM05D000260 ORTHO05D000318 3.2e-10 70.1 245 26.9
PGSC0003DMG400001269 Solanum tuberosum HOM05D000072 ORTHO05D000318 3.2e-10 70.1 223 27.4
TPR.G20728 Trifolium pratense HOM05D000260 ORTHO05D000318 3.2e-10 70.1 253 26.1
Nitab4.5_0000694g0020 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.2e-10 69.7 249 26.5
Oeu054969.1 Olea europaea HOM05D000072 ORTHO05D000026 4.2e-10 69.7 252 28.6
CAN.G610.12 Capsicum annuum HOM05D000072 ORTHO05D000026 5.4e-10 69.3 199 28.1
Lj5g0000278 Lotus japonicus HOM05D000072 ORTHO05D000026 5.4e-10 69.3 230 27.8
Nitab4.5_0005528g0040 Nicotiana tabacum HOM05D000072 ORTHO05D000026 5.4e-10 69.3 234 29.5
Peaxi162Scf00179g00222 Petunia axillaris HOM05D000260 ORTHO05D000318 5.4e-10 69.3 243 27.6
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 5.4e-10 69.3 250 30.8
VMungo0720G1457 Vigna mungo HOM05D000260 ORTHO05D000318 5.4e-10 69.3 230 27.4
Phvul.007G030900 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 7.1e-10 68.9 257 26.1
PGSC0003DMG400030579 Solanum tuberosum HOM05D000072 ORTHO05D000026 7.1e-10 68.9 260 26.5
PGSC0003DMG400030536 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.6e-09 67.8 223 29.1
QL01p010994 Quercus lobata HOM05D000072 ORTHO05D000026 2.1e-09 67.4 253 30.8
Hund25041 Selenicereus undatus HOM05D000260 ORTHO05D000318 2.1e-09 67.4 247 26.3
VMungo0720G0489 Vigna mungo HOM05D000260 ORTHO05D000318 2.1e-09 67.4 248 26.6
CAN.G610.32 Capsicum annuum HOM05D000260 ORTHO05D000318 2.7e-09 67.0 227 25.6
PGSC0003DMG402030531 Solanum tuberosum HOM05D000260 ORTHO05D000318 2.7e-09 67.0 256 25.0
CSS0042166 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 4.6e-09 66.2 220 32.7
Psat6g225520 Pisum sativum HOM05D000072 ORTHO05D000026 4.6e-09 66.2 251 27.1
PGSC0003DMG400030534 Solanum tuberosum HOM05D000260 ORTHO05D000318 4.6e-09 66.2 235 26.0
FAN17G2038 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.8e-09 65.5 265 26.0
Oeu059491.1 Olea europaea HOM05D000072 ORTHO05D000026 7.8e-09 65.5 227 26.9
CSS0021340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.3e-08 64.7 241 26.6
CAN.G610.33 Capsicum annuum HOM05D000260 ORTHO05D000318 1.3e-08 64.7 262 26.0
CiPaw.05G240400 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.3e-08 64.7 241 28.2
C05p25120 Brassica napus HOM05D000260 ORTHO05D000318 1.7e-08 64.3 203 29.6
Oeu054974.1 Olea europaea HOM05D000260 ORTHO05D000318 1.7e-08 64.3 259 26.6
PGSC0003DMG400030535 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.7e-08 64.3 218 27.5
Nitab4.5_0011933g0010 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.3e-08 63.9 258 25.2
Peaxi162Scf00179g00221 Petunia axillaris HOM05D000260 ORTHO05D000318 2.3e-08 63.9 261 29.9
BraA09t39426Z Brassica rapa HOM05D000260 ORTHO05D000318 3.0e-08 63.5 239 25.9
CSS0014137 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.0e-08 63.5 254 25.6
CSS0049650 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.0e-08 63.5 262 27.9
Psat0s3198g0040 Pisum sativum HOM05D000072 ORTHO05D000026 3.9e-08 63.2 249 25.7
A09p39260 Brassica napus HOM05D000260 ORTHO05D000318 5.1e-08 62.8 203 28.1
vmacro21019 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 5.1e-08 62.8 247 27.9
Dinv41671 Davidia involucrata HOM05D008908 ORTHO05D010362 8.7e-08 62.0 261 30.3
Lj5g0003818 Lotus japonicus HOM05D000072 ORTHO05D000026 8.7e-08 62.0 255 25.5
vmacro10594 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 8.7e-08 62.0 222 26.1
Dinv41670 Davidia involucrata HOM05D016466 ORTHO05D010362 1.1e-07 61.6 224 29.5
vmacro10592 Vaccinium macrocarpon HOM05D000260 ORTHO05D000318 1.5e-07 61.2 244 28.7
Glyma.10G271200 Glycine max HOM05D000260 ORTHO05D000318 1.9e-07 60.8 229 25.3
Glyma.10G271701 Glycine max HOM05D000072 ORTHO05D000026 1.9e-07 60.8 228 25.4
CAN.G610.17 Capsicum annuum HOM05D000072 ORTHO05D000026 2.5e-07 60.5 211 25.6
HanXRQChr17g0552991 Helianthus annuus HOM05D000260 ORTHO05D000318 2.5e-07 60.5 235 26.4
Nitab4.5_0000694g0040 Nicotiana tabacum HOM05D008908 ORTHO05D010362 2.5e-07 60.5 218 30.3
BcaC05g26468 Brassica carinata HOM05D000260 ORTHO05D000318 4.3e-07 59.7 203 28.6
BolC5t31244H Brassica oleracea HOM05D000260 ORTHO05D000318 4.3e-07 59.7 203 27.6
Lalb_Chr06g0165881 Lupinus albus HOM05D000260 ORTHO05D000318 4.3e-07 59.7 258 27.1
Thhalv10007057m.g Eutrema salsugineum HOM05D000260 ORTHO05D000318 5.6e-07 59.3 231 27.7
HanXRQChr04g0126151 Helianthus annuus HOM05D000072 ORTHO05D000026 5.6e-07 59.3 261 26.4
CiPaw.06G016900 Carya illinoinensis HOM05D000072 ORTHO05D000026 7.3e-07 58.9 254 29.9
CiPaw.06G017100 Carya illinoinensis HOM05D000260 ORTHO05D000318 7.3e-07 58.9 254 29.9
Phvul.007G030300 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 7.3e-07 58.9 258 27.1
Medtr1g110130 Medicago truncatula HOM05D000260 ORTHO05D000318 9.6e-07 58.5 242 26.0
EL10Ac6g14321 Beta vulgaris HOM05D000260 ORTHO05D000318 1.3e-06 58.2 137 34.3
CAN.G610.39 Capsicum annuum HOM05D000260 ORTHO05D000318 1.3e-06 58.2 226 28.3
CAN.G610.38 Capsicum annuum HOM05D000260 ORTHO05D000318 2.1e-06 57.4 227 26.9
Lj5g0013417 Lotus japonicus HOM05D000260 ORTHO05D000318 3.6e-06 56.6 250 24.8
Lalb_Chr06g0165911 Lupinus albus HOM05D000072 ORTHO05D000026 3.6e-06 56.6 258 26.7
arahy.Tifrunner.gnm1.ann1.12LLDS Arachis hypogaea HOM05D000072 ORTHO05D000026 4.8e-06 56.2 267 24.3
Hma1.2p1_2390F.1_g321190 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 4.8e-06 56.2 146 37.7
CSS0044018 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 8.1e-06 55.5 256 24.6
TAR374G0569 Trochodendron aralioides HOM05D000260 ORTHO05D000318 8.1e-06 55.5 153 34.6


User provided reference genes

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