Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1788 Acer truncatum HOM05D045280 ORTHO05D051915 7.3e-144 514.2 333 100.0
Ciclev10030702m.g Citrus clementina HOM05D000532 ORTHO05D002414 1.7e-23 114.4 323 33.1
Thecc.02G346600 Theobroma cacao HOM05D000532 ORTHO05D002414 7.6e-16 89.0 185 35.1
TAR622G0572 Trochodendron aralioides HOM05D000532 ORTHO05D002414 1.4e-14 84.7 224 31.7
Manes.05G101200 Manihot esculenta HOM05D000532 ORTHO05D002414 1.2e-13 81.6 169 34.9
Eucgr.B03443 Eucalyptus grandis HOM05D000532 ORTHO05D002414 1.6e-13 81.3 178 39.9
Duzib251G0238 Durio zibethinus HOM05D000532 ORTHO05D002414 7.9e-13 79.0 191 34.6
Actinidia04102 Actinidia chinensis HOM05D000532 ORTHO05D002414 1.8e-12 77.8 150 32.7
Gohir.D02G125600 Gossypium hirsutum HOM05D000532 ORTHO05D002414 3.0e-12 77.0 184 35.9
Prupe.1G274600 Prunus persica HOM05D000532 ORTHO05D002414 6.7e-12 75.9 191 33.0
Gorai.005G141300 Gossypium raimondii HOM05D000532 ORTHO05D002414 7.4e-11 72.4 184 34.8
Gohir.A03G100800 Gossypium hirsutum HOM05D000532 ORTHO05D002414 9.6e-11 72.0 136 38.2
QL03p063374 Quercus lobata HOM05D000532 ORTHO05D002414 6.2e-10 69.3 149 36.2
QL03p064089 Quercus lobata HOM05D000532 ORTHO05D002414 6.2e-10 69.3 149 36.2
PGR102G2528 Punica granatum HOM05D000532 ORTHO05D002414 8.2e-10 68.9 169 32.5
GSVIVG01019984001 Vitis vinifera HOM05D000532 ORTHO05D002414 2.4e-09 67.4 183 35.5
CANSAT64G2915 Cannabis sativa HOM05D000532 ORTHO05D002414 1.5e-08 64.7 183 26.2
TAR629G0761 Trochodendron aralioides HOM05D000532 ORTHO05D002414 2.0e-08 64.3 234 28.6
Manes.01G185800 Manihot esculenta HOM05D000532 ORTHO05D002414 1.0e-07 62.0 100 39.0
Atru.chr2.3771 Acer truncatum HOM05D045280 ORTHO05D052094 1.3e-07 61.6 68 55.9
CSS0019372 Camellia sinensis var. sinensis HOM05D000532 ORTHO05D002414 1.3e-07 61.6 155 29.0
Cfa008984 Carpinus fangiana HOM05D000532 ORTHO05D002414 3.8e-07 60.1 181 32.0
Gorai.013G085400 Gossypium raimondii HOM05D000532 ORTHO05D002414 3.8e-07 60.1 173 34.1
CSS0022260 Camellia sinensis var. sinensis HOM05D000532 ORTHO05D002414 6.5e-07 59.3 136 33.1
Haze_12014 Corylus avellana HOM05D000532 ORTHO05D002414 6.5e-07 59.3 177 32.2
THA.LOC104822913 Tarenaya hassleriana HOM05D000532 ORTHO05D002414 4.2e-06 56.6 184 34.2
MD16G1072900 Malus domestica HOM05D000532 ORTHO05D002414 5.5e-06 56.2 181 30.4
CiPaw.05G135500 Carya illinoinensis HOM05D000532 ORTHO05D002414 9.3e-06 55.5 169 32.0


User provided reference genes

Program Settings