Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1631 Acer truncatum HOM05D003287 ORTHO05D003688 1.3e-62 242.7 108 100.0
Atru.chr11.1634 Acer truncatum HOM05D003287 ORTHO05D003688 5.6e-45 184.1 83 96.4
Dinv34069 Davidia involucrata HOM05D000677 ORTHO05D000727 1.5e-34 149.4 86 73.3
Dinv34070 Davidia involucrata HOM05D000677 ORTHO05D000727 2.0e-34 149.1 86 73.3
Dinv16734 Davidia involucrata HOM05D003287 ORTHO05D003688 4.5e-34 147.9 83 75.9
Nitab4.5_0000231g0330 Nicotiana tabacum HOM05D003287 ORTHO05D003688 1.7e-33 146.0 87 72.4
vmacro10425 Vaccinium macrocarpon HOM05D003287 ORTHO05D003688 1.9e-32 142.5 83 68.7
Hma1.2p1_0566F.1_g179780 Hydrangea macrophylla HOM05D003287 ORTHO05D003688 7.2e-32 140.6 83 71.1
MSTRG.2304 Avicennia marina HOM05D003287 ORTHO05D003688 9.3e-32 140.2 85 65.9
CSS0023681 Camellia sinensis var. sinensis HOM05D003287 ORTHO05D003688 1.6e-31 139.4 83 71.1
Solyc05g012280.3 Solanum lycopersicum HOM05D003287 ORTHO05D003688 2.1e-31 139.0 87 70.1
QL12p030788 Quercus lobata HOM05D003287 ORTHO05D003688 2.7e-31 138.7 83 68.7
Sopen05g007110 Solanum pennellii HOM05D003287 ORTHO05D003688 6.1e-31 137.5 87 69.0
PGSC0003DMG400028372 Solanum tuberosum HOM05D003287 ORTHO05D003688 6.1e-31 137.5 84 71.4
GSVIVG01012219001 Vitis vinifera HOM05D005706 ORTHO05D007474 6.1e-31 137.5 84 71.4
Peaxi162Scf00175g00117 Petunia axillaris HOM05D003287 ORTHO05D003688 2.3e-30 135.6 87 65.5
Ciclev10033305m.g Citrus clementina HOM05D005706 ORTHO05D007474 6.7e-30 134.0 83 66.3
Haze_11909 Corylus avellana HOM05D003287 ORTHO05D003688 8.8e-30 133.7 79 72.2
CiPaw.05G125300 Carya illinoinensis HOM05D005706 ORTHO05D007474 1.5e-29 132.9 83 68.7
Gohir.D13G082200 Gossypium hirsutum HOM05D005706 ORTHO05D007474 1.9e-29 132.5 76 71.1
HanXRQChr12g0375241 Helianthus annuus HOM05D003287 ORTHO05D003688 4.3e-29 131.3 88 60.2
Cc11_g11990 Coffea canephora HOM05D005706 ORTHO05D007474 5.7e-29 131.0 83 61.4
Gorai.013G094000 Gossypium raimondii HOM05D005706 ORTHO05D007474 7.4e-29 130.6 76 69.7
Lsat_1_v5_gn_3_53820 Lactuca sativa HOM05D000677 ORTHO05D000727 1.3e-28 129.8 83 62.7
arahy.Tifrunner.gnm1.ann1.AJ34HY Arachis hypogaea HOM05D003287 ORTHO05D003688 1.7e-28 129.4 85 63.5
arahy.Tifrunner.gnm1.ann1.CTL4DA Arachis hypogaea HOM05D003287 ORTHO05D003688 2.2e-28 129.0 85 63.5
Eucgr.B03150 Eucalyptus grandis HOM05D005706 ORTHO05D007474 3.7e-28 128.3 83 65.1
Potri.008G095900 Populus trichocarpa HOM05D003287 ORTHO05D003688 3.7e-28 128.3 83 63.9
Sabra08G0072300 Salix brachista HOM05D003287 ORTHO05D003688 4.8e-28 127.9 81 66.7
PGR102G1693 Punica granatum HOM05D003287 ORTHO05D003688 1.1e-27 126.7 83 62.7
Sabra10G0120400 Salix brachista HOM05D003287 ORTHO05D003688 1.4e-27 126.3 83 65.1
Potri.010G158500 Populus trichocarpa HOM05D003287 ORTHO05D003688 1.8e-27 125.9 83 62.7
FAN22G0408 Fragaria x ananassa HOM05D003287 ORTHO05D003688 3.1e-27 125.2 79 65.8
Manes.01G027500 Manihot esculenta HOM05D003287 ORTHO05D003688 3.1e-27 125.2 83 63.9
COL.COLO4_27884 Corchorus olitorius HOM05D003287 ORTHO05D003688 4.1e-27 124.8 75 65.3
ECA246G1951 Erigeron canadensis HOM05D003287 ORTHO05D003688 4.1e-27 124.8 85 57.6
TAR629G0740 Trochodendron aralioides HOM05D003322 ORTHO05D004228 5.3e-27 124.4 83 63.9
FvH4_4g30030 Fragaria vesca HOM05D003287 ORTHO05D003688 6.9e-27 124.0 79 65.8
FAN12G3100 Fragaria x ananassa HOM05D003287 ORTHO05D003688 6.9e-27 124.0 79 65.8
Rhsim09G0127300 Rhododendron simsii HOM05D003287 ORTHO05D003688 1.2e-26 123.2 64 81.2
Duzib251G0290 Durio zibethinus HOM05D003287 ORTHO05D003688 2.0e-26 122.5 79 63.3
FAN07G1653 Fragaria x ananassa HOM05D003287 ORTHO05D003688 2.0e-26 122.5 79 64.6
Thecc.02G330400 Theobroma cacao HOM05D003287 ORTHO05D003688 2.0e-26 122.5 74 66.2
MD13G1062800 Malus domestica HOM05D003287 ORTHO05D003688 2.6e-26 122.1 79 64.6
TAR264G0005 Trochodendron aralioides HOM05D003287 ORTHO05D003688 3.4e-26 121.7 80 61.2
Gohir.A13G082600 Gossypium hirsutum HOM05D005706 ORTHO05D007474 5.9e-26 120.9 75 65.3
Aqoxy3G03695 Aquilegia oxysepala HOM05D003287 ORTHO05D003688 2.9e-25 118.6 83 55.4
TWI31G0714 Tripterygium wilfordii HOM05D003287 ORTHO05D003688 1.4e-24 116.3 83 62.7
CANSAT64G1368 Cannabis sativa HOM05D003287 ORTHO05D003688 2.5e-24 115.5 66 66.7
RcHm_v2.0_Chr4g0438321 Rosa chinensis HOM05D003287 ORTHO05D003688 7.2e-24 114.0 66 71.2
arahy.Tifrunner.gnm1.ann1.9XQY3T Arachis hypogaea HOM05D003287 ORTHO05D003688 1.2e-23 113.2 80 60.0
Nitab4.5_0001487g0120 Nicotiana tabacum HOM05D003287 ORTHO05D003688 1.6e-23 112.8 70 71.4
arahy.Tifrunner.gnm1.ann1.SMG0EF Arachis hypogaea HOM05D003287 ORTHO05D003688 2.1e-23 112.5 80 60.0
arahy.Tifrunner.gnm1.ann1.W0ETWJ Arachis hypogaea HOM05D003287 ORTHO05D003688 6.1e-23 110.9 77 59.7
Prupe.1G286900 Prunus persica HOM05D003287 ORTHO05D003688 7.9e-23 110.5 82 58.5
SalBow8G3723 Salvia bowleyana HOM05D003287 ORTHO05D003688 8.8e-22 107.1 84 52.4
DCAR_023802 Daucus carota HOM05D000619 ORTHO05D008420 2.6e-21 105.5 64 68.8
MBI19_g30539_MAGBIO Magnolia biondii HOM05D003287 ORTHO05D003688 2.6e-18 95.5 65 55.4
Actinidia13393 Actinidia chinensis HOM05D005706 ORTHO05D007474 7.7e-18 94.0 55 70.9
SEGI_08810 Sequoiadendron giganteum HOM05D003287 ORTHO05D003688 1.1e-13 80.1 70 42.9
SEGI_28894 Sequoiadendron giganteum HOM05D003287 ORTHO05D003688 1.1e-13 80.1 70 42.9
ATR0177G004 Amborella trichopoda HOM05D003287 ORTHO05D003688 1.5e-13 79.7 68 48.5
SEGI_13335 Sequoiadendron giganteum HOM05D003287 ORTHO05D003688 4.4e-13 78.2 68 44.1
Duzib187G0275 Durio zibethinus HOM05D003287 ORTHO05D003688 1.8e-11 72.8 69 42.0
CSS0029206 Camellia sinensis var. sinensis HOM05D003287 ORTHO05D003688 7.0e-11 70.9 64 43.8
Cc07_g14970 Coffea canephora HOM05D003287 ORTHO05D003688 7.0e-11 70.9 83 41.0
CSS0035567 Camellia sinensis var. sinensis HOM05D003287 ORTHO05D003688 1.2e-10 70.1 64 43.8
CSS0039777 Camellia sinensis var. sinensis HOM05D003287 ORTHO05D003688 1.6e-10 69.7 64 43.8
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 2.0e-10 69.3 74 39.2
Thecc.01G099000 Theobroma cacao HOM05D003287 ORTHO05D003688 2.0e-10 69.3 80 36.2
FAN22G2046 Fragaria x ananassa HOM05D003287 ORTHO05D003688 2.6e-10 68.9 70 45.7
COL.COLO4_27270 Corchorus olitorius HOM05D003287 ORTHO05D003688 4.5e-10 68.2 61 41.0
PGR119G1934 Punica granatum HOM05D003287 ORTHO05D003688 4.5e-10 68.2 70 42.9
Lj6P796T40 Lonicera japonica HOM05D003287 ORTHO05D003688 5.9e-10 67.8 70 41.4
Nitab4.5_0000408g0030 Nicotiana tabacum HOM05D003287 ORTHO05D003688 5.9e-10 67.8 87 36.8
RcHm_v2.0_Chr4g0445181 Rosa chinensis HOM05D003287 ORTHO05D003688 5.9e-10 67.8 79 43.0
Duzib147G1442 Durio zibethinus HOM05D003287 ORTHO05D003688 1.0e-09 67.0 60 46.7
FvH4_4g35530 Fragaria vesca HOM05D003287 ORTHO05D003688 1.0e-09 67.0 66 45.5
CSS0002708 Camellia sinensis var. sinensis HOM05D003287 ORTHO05D003688 1.3e-09 66.6 67 40.3
FAN07G0260 Fragaria x ananassa HOM05D003287 ORTHO05D003688 1.3e-09 66.6 66 45.5
FAN17G0444 Fragaria x ananassa HOM05D003287 ORTHO05D003688 1.3e-09 66.6 66 45.5
MBI04_g26972_MAGBIO Magnolia biondii HOM05D003287 ORTHO05D003688 1.3e-09 66.6 80 35.0
GSVIVG01006040001 Vitis vinifera HOM05D003287 ORTHO05D003688 1.3e-09 66.6 77 37.7
Atru.chr3.1410 Acer truncatum HOM05D003287 ORTHO05D003688 1.7e-09 66.2 67 43.3
CDE11G0724 Ceratophyllum demersum HOM05D003287 ORTHO05D003688 1.7e-09 66.2 76 36.8
Solyc05g006700.4 Solanum lycopersicum HOM05D003287 ORTHO05D003688 1.7e-09 66.2 70 41.4
Sopen05g002650 Solanum pennellii HOM05D003287 ORTHO05D003688 1.7e-09 66.2 70 41.4
MD16G1081500 Malus domestica HOM05D003287 ORTHO05D003688 2.2e-09 65.9 78 42.3
Gohir.A12G088200 Gossypium hirsutum HOM05D003287 ORTHO05D003688 2.9e-09 65.5 61 41.0
Gohir.D12G086400 Gossypium hirsutum HOM05D003287 ORTHO05D003688 2.9e-09 65.5 61 41.0
Gorai.008G096700 Gossypium raimondii HOM05D003287 ORTHO05D003688 2.9e-09 65.5 61 41.0
PGSC0003DMG400022598 Solanum tuberosum HOM05D003287 ORTHO05D003688 2.9e-09 65.5 70 40.0
Atru.chr4.1489 Acer truncatum HOM05D003287 ORTHO05D003688 3.8e-09 65.1 61 44.3
ATR0001G059 Amborella trichopoda HOM05D003287 ORTHO05D003688 3.8e-09 65.1 78 39.7
CAN.G27.49 Capsicum annuum HOM05D003287 ORTHO05D003688 3.8e-09 65.1 70 38.6
ATR0661G380 Amborella trichopoda HOM05D003287 ORTHO05D003688 5.0e-09 64.7 78 34.6
MD13G1082400 Malus domestica HOM05D003287 ORTHO05D003688 5.0e-09 64.7 79 40.5
ECA246G2920 Erigeron canadensis HOM05D003287 ORTHO05D003688 8.5e-09 63.9 83 32.5
Nitab4.5_0002052g0030 Nicotiana tabacum HOM05D003287 ORTHO05D003688 8.5e-09 63.9 71 38.0
Lsat_1_v5_gn_3_50580 Lactuca sativa HOM05D003287 ORTHO05D003688 1.1e-08 63.5 71 38.0
Manes.12G133100 Manihot esculenta HOM05D003287 ORTHO05D003688 1.1e-08 63.5 71 38.0
Peaxi162Scf00026g00214 Petunia axillaris HOM05D003287 ORTHO05D003688 1.1e-08 63.5 71 36.6
QL03p066527 Quercus lobata HOM05D003287 ORTHO05D003688 1.1e-08 63.5 69 44.9
FvH4_1g20600 Fragaria vesca HOM05D003287 ORTHO05D003688 1.5e-08 63.2 74 37.8
FAN19G3170 Fragaria x ananassa HOM05D003287 ORTHO05D003688 1.5e-08 63.2 74 37.8
Glyma.05G177200 Glycine max HOM05D003287 ORTHO05D003688 1.5e-08 63.2 67 38.8
Hma1.2p1_0190F.1_g082970 Hydrangea macrophylla HOM05D003287 ORTHO05D003688 1.5e-08 63.2 67 40.3
Lj2g0013263 Lotus japonicus HOM05D003287 ORTHO05D003688 1.5e-08 63.2 61 42.6
Hund25287 Selenicereus undatus HOM05D003287 ORTHO05D003688 1.5e-08 63.2 81 34.6
FAN26G2679 Fragaria x ananassa HOM05D003287 ORTHO05D003688 1.9e-08 62.8 74 37.8
Nitab4.5_0002594g0060 Nicotiana tabacum HOM05D003287 ORTHO05D003688 1.9e-08 62.8 71 36.6
Phvul.002G257200 Phaseolus vulgaris HOM05D003287 ORTHO05D003688 1.9e-08 62.8 67 37.3
Psat2g114880 Pisum sativum HOM05D003287 ORTHO05D003688 1.9e-08 62.8 73 39.7
TPR.G26727 Trifolium pratense HOM05D003287 ORTHO05D003688 1.9e-08 62.8 59 44.1
Haze_12088 Corylus avellana HOM05D003287 ORTHO05D003688 2.5e-08 62.4 86 37.2
FAN23G0100 Fragaria x ananassa HOM05D003287 ORTHO05D003688 2.5e-08 62.4 68 38.2
Prupe.3G121800 Prunus persica HOM05D003287 ORTHO05D003688 2.5e-08 62.4 82 41.5
Dinv13204 Davidia involucrata HOM05D003287 ORTHO05D003688 3.2e-08 62.0 67 38.8
Peaxi162Scf00209g00931 Petunia axillaris HOM05D003287 ORTHO05D003688 3.2e-08 62.0 70 38.6
GSVIVG01020110001 Vitis vinifera HOM05D003287 ORTHO05D003688 3.2e-08 62.0 75 37.3
Medtr5g037310 Medicago truncatula HOM05D003287 ORTHO05D003688 4.2e-08 61.6 74 39.2
arahy.Tifrunner.gnm1.ann1.IV17LC Arachis hypogaea HOM05D003287 ORTHO05D003688 5.5e-08 61.2 74 40.5
CiPaw.03G143400 Carya illinoinensis HOM05D003287 ORTHO05D003688 5.5e-08 61.2 80 38.8
Glyma.01G039900 Glycine max HOM05D003287 ORTHO05D003688 5.5e-08 61.2 74 39.2
Nn5g30082 Nelumbo nucifera HOM05D003287 ORTHO05D003688 5.5e-08 61.2 75 29.3
CiPaw.05G142400 Carya illinoinensis HOM05D003287 ORTHO05D003688 7.2e-08 60.8 58 46.6
Duzib251G0030 Durio zibethinus HOM05D003287 ORTHO05D003688 7.2e-08 60.8 59 44.1
Eucgr.I00510 Eucalyptus grandis HOM05D003287 ORTHO05D003688 7.2e-08 60.8 93 31.2
Sed0016162 Sechium edule HOM05D003287 ORTHO05D003688 7.2e-08 60.8 59 44.1
VMungo0251G1736 Vigna mungo HOM05D003287 ORTHO05D003688 7.2e-08 60.8 67 37.3
Ca_04687_v3 Cicer arietinum L. HOM05D003287 ORTHO05D003688 9.4e-08 60.5 74 37.8
ClCG08G009030 Citrullus lanatus HOM05D003287 ORTHO05D003688 9.4e-08 60.5 59 44.1
Prupe.6G189700 Prunus persica HOM05D003287 ORTHO05D003688 9.4e-08 60.5 66 42.4
TWI75G1209 Tripterygium wilfordii HOM05D003287 ORTHO05D003688 9.4e-08 60.5 58 43.1
Cfa009055 Carpinus fangiana HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 44.1
Glyma.02G024900 Glycine max HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 44.1
Gohir.A03G145300 Gossypium hirsutum HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 44.1
Gohir.D02G168700 Gossypium hirsutum HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 44.1
Gorai.005G189100 Gossypium raimondii HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 44.1
Sabra10G0026600 Salix brachista HOM05D003287 ORTHO05D003688 1.2e-07 60.1 59 42.4
Ah.02g131880 Amaranthus hybridus HOM05D003287 ORTHO05D003688 1.6e-07 59.7 85 29.4
Cc11_g13740 Coffea canephora HOM05D003287 ORTHO05D003688 1.6e-07 59.7 71 42.3
CsaV3_6G036120 Cucumis sativus L. HOM05D003287 ORTHO05D003688 1.6e-07 59.7 59 42.4
HanXRQChr17g0544541 Helianthus annuus HOM05D003287 ORTHO05D003688 1.6e-07 59.7 70 35.7
arahy.Tifrunner.gnm1.ann1.7VFA6D Arachis hypogaea HOM05D003287 ORTHO05D003688 2.1e-07 59.3 59 42.4
EL10Ac6g13121 Beta vulgaris HOM05D003287 ORTHO05D003688 2.1e-07 59.3 84 31.0
PSO761G0447 Papaver somniferum HOM05D003287 ORTHO05D003688 2.1e-07 59.3 74 37.8
Potri.010G040500 Populus trichocarpa HOM05D003287 ORTHO05D003688 2.1e-07 59.3 61 41.0
SGA_v2.0_scaffold166G38304 Striga asiatica HOM05D003287 ORTHO05D003688 2.1e-07 59.3 68 41.2
CANSAT01G0301 Cannabis sativa HOM05D003287 ORTHO05D003688 3.6e-07 58.5 78 35.9
Manes.01G192800 Manihot esculenta HOM05D003287 ORTHO05D003688 3.6e-07 58.5 59 40.7
Nn4g22993 Nelumbo nucifera HOM05D003287 ORTHO05D003688 3.6e-07 58.5 69 37.7
PSO210G2606 Papaver somniferum HOM05D003287 ORTHO05D003688 3.6e-07 58.5 74 37.8
QL06p048933 Quercus lobata HOM05D003287 ORTHO05D003688 3.6e-07 58.5 67 34.3
MELO3C000449.2 Cucumis melo HOM05D003287 ORTHO05D003688 4.7e-07 58.2 59 42.4
Lalb_Chr05g0217491 Lupinus albus HOM05D003287 ORTHO05D003688 4.7e-07 58.2 74 37.8
Phvul.002G080000 Phaseolus vulgaris HOM05D003287 ORTHO05D003688 4.7e-07 58.2 87 35.6
TWI18G0836 Tripterygium wilfordii HOM05D003287 ORTHO05D003688 4.7e-07 58.2 58 41.4
AUR62026295 Chenopodium quinoa HOM05D003287 ORTHO05D003688 6.1e-07 57.8 59 37.3
AUR62026487 Chenopodium quinoa HOM05D003287 ORTHO05D003688 6.1e-07 57.8 59 37.3
VMungo1215G2363 Vigna mungo HOM05D003287 ORTHO05D003688 6.1e-07 57.8 76 36.8
Duzib248G0322 Durio zibethinus HOM05D003287 ORTHO05D003688 8.0e-07 57.4 59 42.4
Migut.L00145 Erythranthe guttata HOM05D003287 ORTHO05D003688 1.0e-06 57.0 76 31.6
Rhsim12G0128300 Rhododendron simsii HOM05D003287 ORTHO05D003688 1.0e-06 57.0 59 39.0
Sc04g0008570 Simmondsia chinensis HOM05D003287 ORTHO05D003688 1.8e-06 56.2 64 37.5
PSO781G0085 Papaver somniferum HOM05D003287 ORTHO05D003688 3.0e-06 55.5 69 36.2
PSO591G0121 Papaver somniferum HOM05D003287 ORTHO05D003688 5.2e-06 54.7 59 37.3
PSO832G2557 Papaver somniferum HOM05D003287 ORTHO05D003688 5.2e-06 54.7 59 37.3
Sabra07G0078200 Salix brachista HOM05D003287 ORTHO05D003688 5.2e-06 54.7 60 36.7
SalBow5G5311 Salvia bowleyana HOM05D003287 ORTHO05D003688 6.7e-06 54.3 66 37.9
AT1G10380 Arabidopsis thaliana HOM05D003287 ORTHO05D003688 8.8e-06 53.9 68 35.3
MSTRG.657 Avicennia marina HOM05D003287 ORTHO05D003688 8.8e-06 53.9 67 41.8
Cpa.g.sc5.295 Carica papaya HOM05D003287 ORTHO05D003688 8.8e-06 53.9 70 38.6
Ciclev10026163m.g Citrus clementina HOM05D003287 ORTHO05D003688 8.8e-06 53.9 60 40.0
Potri.007G094800 Populus trichocarpa HOM05D003287 ORTHO05D003688 8.8e-06 53.9 63 34.9


User provided reference genes

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