Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 4.0e-145 518.1 262 100.0
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 4.0e-145 518.1 262 100.0
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 2.7e-109 399.1 264 75.4
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.0e-108 397.1 271 73.4
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.3e-106 390.2 272 72.8
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.1e-106 389.4 263 74.5
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 8.2e-106 387.5 271 72.3
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 2.4e-105 386.0 271 72.0
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 6.9e-105 384.4 274 71.9
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 4.5e-104 381.7 268 70.1
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 6.5e-103 377.9 260 73.1
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 6.5e-103 377.9 271 70.1
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 8.4e-103 377.5 272 71.7
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.5e-102 375.9 272 72.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 4.2e-102 375.2 271 70.1
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 7.9e-101 370.9 271 70.1
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 7.4e-99 364.4 265 72.1
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.8e-98 361.7 266 69.2
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 8.2e-98 360.9 255 70.2
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.1e-94 350.5 264 66.7
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.4e-94 350.1 273 67.0
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.4e-94 350.1 272 68.0
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 1.2e-93 347.1 265 67.2
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 7.9e-93 344.4 272 66.5
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.3e-92 342.8 266 68.0
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 3.9e-92 342.0 271 66.4
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 3.9e-92 342.0 270 64.8
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.1e-92 341.7 271 66.1
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.5e-91 340.1 271 65.3
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 1.3e-90 337.0 263 68.8
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.7e-90 336.7 271 65.3
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 4.8e-90 335.1 270 66.7
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.4e-89 333.6 259 66.0
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 1.4e-89 333.6 268 64.6
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.4e-89 333.6 271 63.8
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 4.1e-89 332.0 268 64.6
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 5.3e-89 331.6 268 65.3
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 5.3e-89 331.6 271 64.2
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 5.9e-88 328.2 273 62.6
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.3e-87 327.0 271 65.3
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 1.3e-87 327.0 268 63.4
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.3e-87 327.0 271 63.1
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 2.2e-87 326.2 271 61.6
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 3.8e-87 325.5 268 63.4
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 3.8e-87 325.5 272 63.6
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.0e-87 325.1 268 63.1
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 4.2e-86 322.0 268 62.7
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 5.5e-86 321.6 265 62.6
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 7.2e-86 321.2 269 62.1
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.2e-85 320.5 269 61.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.1e-85 319.7 266 61.7
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 3.6e-85 318.9 268 61.9
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 6.1e-85 318.2 266 63.9
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-84 317.0 270 61.1
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.4e-84 317.0 270 61.1
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.1e-83 313.9 269 61.3
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 1.5e-83 313.5 242 63.2
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.3e-83 312.4 272 59.9
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.3e-83 312.4 272 59.9
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 3.3e-83 312.4 268 61.6
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 5.7e-83 311.6 269 60.6
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 9.7e-83 310.8 271 62.4
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.7e-82 310.1 269 59.1
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 4.8e-82 308.5 269 61.0
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 4.8e-82 308.5 269 61.0
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 9.1e-81 304.3 265 59.2
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.5e-80 302.4 275 60.0
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 4.5e-80 302.0 265 60.4
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 5.9e-80 301.6 271 59.4
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.0e-79 300.8 271 59.4
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.0e-79 300.8 271 59.8
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.7e-79 300.1 267 58.8
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 2.2e-79 299.7 247 62.3
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.9e-79 299.3 267 61.0
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.4e-78 297.0 264 61.4
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 4.2e-78 295.4 244 62.3
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 9.4e-78 294.3 268 59.3
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 3.9e-76 288.9 247 61.1
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 8.2e-74 281.2 214 67.8
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 4.1e-73 278.9 271 56.5
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 4.1e-73 278.9 265 60.4
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.2e-71 273.1 271 55.7
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 1.1e-70 270.8 212 62.7
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 6.3e-66 255.0 191 67.0
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 3.1e-65 252.7 267 52.8
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 4.2e-62 242.3 236 59.3
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 2.7e-61 239.6 264 49.2
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 6.1e-61 238.4 265 51.3
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 4.0e-60 235.7 267 49.1
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 1.2e-56 224.2 262 45.8
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.6e-56 223.8 269 44.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 1.3e-55 220.7 264 47.0
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 1.3e-55 220.7 264 47.0
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 2.3e-55 219.9 268 47.8
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 2.9e-55 219.5 262 46.6
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.1e-54 217.6 265 49.1
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.1e-54 217.6 246 50.8
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 2.5e-54 216.5 265 47.9
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 1.2e-53 214.2 255 45.9
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 2.8e-53 213.0 243 50.6
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 8.0e-53 211.5 158 66.5
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.5e-51 207.2 264 46.6
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.5e-46 189.9 191 51.3
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 5.6e-46 188.7 191 50.8
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.1e-45 186.8 266 43.2
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 4.1e-41 172.6 241 44.0
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 6.2e-37 158.7 266 37.6
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 6.6e-31 138.7 88 76.1
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.4e-28 131.0 216 40.3
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 2.3e-28 130.2 148 48.6
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 1.3e-26 124.4 218 37.6
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 6.4e-26 122.1 217 38.2
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.7e-23 114.0 249 34.5
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 3.3e-22 109.8 104 57.7
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 4.3e-22 109.4 215 35.8
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.4e-20 104.4 116 46.6
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.8e-20 104.0 109 49.5
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 4.9e-18 95.9 85 54.1
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 5.8e-11 72.4 62 56.5
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 9.9e-11 71.6 63 52.4
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 4.2e-09 66.2 169 29.0
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 1.2e-08 64.7 41 75.6


User provided reference genes

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