Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 3.1e-102 375.2 196 100.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 2.4e-78 295.8 177 92.1
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.1e-70 270.4 177 81.9
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.5e-67 260.0 177 77.4
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.3e-65 252.7 184 73.9
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 5.8e-64 248.1 176 75.0
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 2.2e-63 246.1 178 74.2
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.4e-63 244.6 178 73.0
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 8.3e-63 244.2 178 72.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.4e-62 243.4 178 73.0
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.4e-62 243.4 176 73.9
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.4e-62 242.7 177 72.9
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 7.1e-62 241.1 176 72.2
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.6e-61 240.0 177 72.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.6e-61 240.0 176 71.6
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.1e-61 239.6 180 70.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.7e-61 239.2 177 72.9
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 3.5e-61 238.8 176 73.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.5e-61 238.8 176 70.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.5e-61 238.8 178 71.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 7.8e-61 237.7 160 79.4
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 7.8e-61 237.7 160 79.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.3e-60 236.9 186 68.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-60 236.5 180 68.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 3.0e-60 235.7 183 68.3
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.9e-60 235.3 177 70.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 3.9e-60 235.3 175 72.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.9e-60 235.3 186 69.4
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 5.1e-60 235.0 177 70.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.6e-60 234.6 187 69.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.6e-60 234.2 176 70.5
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.5e-59 233.4 176 71.0
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.9e-59 233.0 176 69.3
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.9e-59 233.0 178 69.1
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 7.3e-59 231.1 176 69.3
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 9.5e-59 230.7 184 66.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 9.5e-59 230.7 158 77.8
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 9.5e-59 230.7 170 71.2
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.2e-58 230.3 184 66.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.6e-58 229.9 171 70.2
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.1e-58 229.6 175 69.7
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.8e-58 229.2 175 69.1
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.8e-58 229.2 175 69.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.8e-58 229.2 176 69.3
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 4.7e-58 228.4 171 69.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 6.2e-58 228.0 176 71.6
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 8.1e-58 227.6 177 68.9
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 8.1e-58 227.6 177 70.1
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 8.1e-58 227.6 176 70.5
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.4e-57 226.9 174 67.2
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.8e-57 226.5 176 69.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.4e-57 226.1 168 73.8
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.1e-57 225.7 184 67.4
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.0e-57 225.3 184 67.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 4.0e-57 225.3 177 69.5
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 5.2e-57 224.9 171 69.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.4e-56 222.2 183 67.8
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.4e-56 222.2 175 67.4
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.4e-56 221.9 180 66.1
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.9e-56 220.7 155 76.8
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.3e-55 220.3 170 67.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.3e-55 220.3 171 67.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.3e-55 220.3 170 67.6
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-55 220.3 176 69.9
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 8.4e-55 217.6 193 61.7
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.4e-54 216.1 157 73.2
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.2e-54 215.7 157 72.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 4.2e-54 215.3 184 62.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.3e-52 210.3 176 66.5
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.3e-52 210.3 181 64.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.7e-52 209.9 195 60.0
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.3e-52 209.5 225 53.8
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.9e-52 208.8 147 74.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.1e-52 208.4 157 72.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.1e-51 207.2 176 65.3
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.5e-51 206.8 156 70.5
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 5.6e-51 204.9 188 59.6
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.2e-50 203.8 142 73.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.1e-50 203.0 176 62.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.8e-50 202.6 176 61.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 6.2e-50 201.4 253 51.8
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.1e-49 200.7 178 61.2
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.4e-49 200.3 175 63.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.8e-49 199.9 226 54.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.9e-49 198.0 175 62.9
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 9.0e-49 197.6 226 54.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 9.9e-48 194.1 176 60.8
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.1e-46 190.7 165 63.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.4e-46 190.3 198 58.1
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.7e-45 186.0 176 56.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 6.0e-45 184.9 141 69.5
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.0e-44 184.1 219 52.1
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.3e-44 183.7 184 51.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.3e-44 183.0 152 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.0e-44 182.6 171 56.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.9e-44 182.2 138 69.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.9e-44 182.2 174 56.3
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 5.6e-43 178.3 104 86.5
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 6.2e-42 174.9 165 57.0
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.4e-41 172.9 138 67.4
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.9e-40 167.5 185 53.0
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.9e-39 165.2 102 81.4
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 6.4e-39 164.9 103 80.6
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.4e-38 163.7 203 48.8
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 4.6e-37 158.7 112 70.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 3.0e-36 156.0 175 54.3
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.6e-34 150.2 211 46.0
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 4.8e-34 148.7 84 89.3
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.8e-26 122.9 165 41.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.8e-26 122.9 168 41.7
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 4.0e-25 119.0 71 80.3
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 4.3e-19 99.0 79 65.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.8e-18 96.3 165 37.6
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 8.2e-18 94.7 106 46.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 3.4e-16 89.4 89 58.4
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.4e-16 89.4 203 36.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.1e-14 84.3 79 57.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 4.2e-14 82.4 154 31.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.3e-10 70.9 157 32.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.8e-10 69.7 61 62.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.4e-09 66.6 39 84.6


User provided reference genes

Program Settings