Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.144 Acer truncatum HOM05D001374 ORTHO05D052827 8.7e-53 209.9 98 100.0
Ciclev10017881m.g Citrus clementina HOM05D001374 ORTHO05D003576 9.4e-15 83.6 89 51.7
MD13G1039700 Malus domestica HOM05D001374 ORTHO05D003576 2.2e-11 72.4 89 48.3
MD16G1040600 Malus domestica HOM05D001374 ORTHO05D003576 4.1e-10 68.2 89 46.1
Prupe.1G313500 Prunus persica HOM05D001374 ORTHO05D003576 7.0e-10 67.4 79 49.4
RcHm_v2.0_Chr4g0434871 Rosa chinensis HOM05D001374 ORTHO05D003576 3.5e-09 65.1 91 46.2
FvH4_4g27070 Fragaria vesca HOM05D001374 ORTHO05D003576 4.5e-09 64.7 91 47.3
FAN12G2560 Fragaria x ananassa HOM05D001374 ORTHO05D003576 4.5e-09 64.7 91 47.3
FAN12G3933 Fragaria x ananassa HOM05D001374 ORTHO05D003576 4.5e-09 64.7 91 47.3
FAN07G0461 Fragaria x ananassa HOM05D001374 ORTHO05D004296 5.9e-09 64.3 91 47.3
Sed0017350 Sechium edule HOM05D001374 ORTHO05D003576 5.9e-09 64.3 72 48.6
FAN17G0272 Fragaria x ananassa HOM05D001374 ORTHO05D003576 7.7e-09 63.9 79 49.4
TWI74G1455 Tripterygium wilfordii HOM05D001374 ORTHO05D003576 1.0e-08 63.5 91 41.8
FAN22G1881 Fragaria x ananassa HOM05D001374 ORTHO05D004296 2.2e-08 62.4 79 49.4
Lalb_Chr17g0335921 Lupinus albus HOM05D001374 ORTHO05D003576 2.9e-08 62.0 69 50.7
PSO063G5256 Papaver somniferum HOM05D001374 ORTHO05D003576 2.9e-08 62.0 71 46.5
Lalb_Chr04g0257481 Lupinus albus HOM05D001374 ORTHO05D003576 3.8e-08 61.6 70 48.6
CDE02G0451 Ceratophyllum demersum HOM05D001374 ORTHO05D003576 5.0e-08 61.2 73 47.9
CiPaw.03G061800 Carya illinoinensis HOM05D001374 ORTHO05D003576 6.5e-08 60.8 74 50.0
VMungo1383G1329 Vigna mungo HOM05D001374 ORTHO05D003576 8.5e-08 60.5 69 52.2
MELO3C005458.2 Cucumis melo HOM05D001374 ORTHO05D003576 1.5e-07 59.7 56 51.8
MBI16_g23455_MAGBIO Magnolia biondii HOM05D001374 ORTHO05D003576 1.5e-07 59.7 80 46.2
TWI77G0977 Tripterygium wilfordii HOM05D001374 ORTHO05D003576 1.5e-07 59.7 91 40.7
CDE09G0363 Ceratophyllum demersum HOM05D001374 ORTHO05D003576 2.5e-07 58.9 71 47.9
ClCG01G004780 Citrullus lanatus HOM05D001374 ORTHO05D003576 2.5e-07 58.9 56 51.8
CsaV3_5G004970 Cucumis sativus L. HOM05D001374 ORTHO05D003576 4.2e-07 58.2 56 50.0
AUR62023298 Chenopodium quinoa HOM05D001374 ORTHO05D003576 7.2e-07 57.4 55 50.9
FvH4_5g21090 Fragaria vesca HOM05D001374 ORTHO05D003576 7.2e-07 57.4 84 41.7
EL10Ac2g04561 Beta vulgaris HOM05D001374 ORTHO05D003576 9.4e-07 57.0 55 50.9
MELO3C020220.2 Cucumis melo HOM05D001374 ORTHO05D003576 1.2e-06 56.6 55 56.4
Migut.H00220 Erythranthe guttata HOM05D001374 ORTHO05D003576 1.2e-06 56.6 64 45.3
FAN18G1256 Fragaria x ananassa HOM05D001374 ORTHO05D003576 1.2e-06 56.6 80 42.5
TAR371G0613 Trochodendron aralioides HOM05D001374 ORTHO05D003576 1.2e-06 56.6 85 44.7
CsaV3_3G020950 Cucumis sativus L. HOM05D001374 ORTHO05D003576 1.6e-06 56.2 55 56.4
FAN08G2237 Fragaria x ananassa HOM05D001374 ORTHO05D003576 1.6e-06 56.2 91 37.4
Glyma.18G296300 Glycine max HOM05D001374 ORTHO05D003576 1.6e-06 56.2 71 43.7
MSTRG.3568 Avicennia marina HOM05D001374 ORTHO05D003576 2.1e-06 55.8 55 52.7
Glyma.08G365900 Glycine max HOM05D001374 ORTHO05D003576 2.1e-06 55.8 73 43.8
Sed0010965 Sechium edule HOM05D001374 ORTHO05D003576 2.1e-06 55.8 65 46.2
SGA_v2.0_scaffold49G18110 Striga asiatica HOM05D001374 ORTHO05D003576 2.1e-06 55.8 56 55.4
Manes.01G110800 Manihot esculenta HOM05D001374 ORTHO05D003576 2.7e-06 55.5 56 53.6
Rhsim10G0067600 Rhododendron simsii HOM05D001374 ORTHO05D003576 2.7e-06 55.5 85 41.2
THA.LOC104808353 Tarenaya hassleriana HOM05D001374 ORTHO05D003576 3.6e-06 55.1 66 48.5
CAN.G82.11 Capsicum annuum HOM05D001374 ORTHO05D003576 6.1e-06 54.3 83 42.2
ClCG05G011620 Citrullus lanatus HOM05D001374 ORTHO05D003576 6.1e-06 54.3 62 50.0
MSTRG.15298 Avicennia marina HOM05D001374 ORTHO05D003576 8.0e-06 53.9 56 48.2
MSTRG.23577 Avicennia marina HOM05D001374 ORTHO05D003576 8.0e-06 53.9 56 55.4
Phvul.008G006200 Phaseolus vulgaris HOM05D001374 ORTHO05D003576 8.0e-06 53.9 69 49.3
RcHm_v2.0_Chr5g0081291 Rosa chinensis HOM05D001374 ORTHO05D003576 8.0e-06 53.9 59 49.2
Sed0014729 Sechium edule HOM05D001374 ORTHO05D003576 8.0e-06 53.9 66 43.9
TAR629G2539 Trochodendron aralioides HOM05D001374 ORTHO05D003576 8.0e-06 53.9 78 43.6


User provided reference genes

Program Settings