Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.9e-185 651.7 331 100.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 5.4e-139 498.0 331 74.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 5.4e-139 498.0 331 74.6
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 8.6e-137 490.7 330 73.3
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.5e-136 489.2 331 74.0
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 3.6e-135 485.3 331 70.7
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.6e-133 479.2 331 71.0
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.4e-133 478.8 332 71.1
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.3e-132 476.9 332 70.8
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 4.9e-132 474.9 331 72.2
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 6.4e-132 474.6 331 72.2
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 6.4e-132 474.6 332 70.5
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 4.2e-131 471.9 332 70.5
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 7.1e-131 471.1 331 72.2
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 2.1e-130 469.5 331 69.8
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 4.6e-130 468.4 331 70.1
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 6.0e-130 468.0 314 74.5
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 5.1e-129 464.9 331 70.1
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 4.3e-128 461.8 333 70.0
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.1e-127 459.5 331 70.7
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.4e-126 456.8 331 70.7
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.2e-125 453.8 331 68.6
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.5e-125 453.4 326 68.1
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.4e-125 452.2 331 68.9
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 7.6e-125 451.1 333 68.5
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.2e-124 449.5 331 69.5
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.9e-124 448.4 331 66.5
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.9e-123 446.4 331 68.6
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.9e-123 446.4 330 67.0
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 2.4e-123 446.0 329 67.2
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 3.2e-123 445.7 331 69.5
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 1.2e-122 443.7 331 66.8
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 4.6e-122 441.8 329 66.6
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 6.0e-122 441.4 331 65.6
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 6.0e-122 441.4 331 68.0
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.9e-122 441.0 329 67.8
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.0e-121 440.7 332 67.8
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 2.3e-121 439.5 329 66.0
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 8.7e-121 437.6 331 66.8
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 1.9e-120 436.4 329 66.0
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.9e-120 436.4 331 64.0
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.3e-120 435.3 331 66.8
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.3e-119 433.7 332 65.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.3e-119 433.7 329 66.3
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.3e-119 433.7 331 66.5
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.1e-119 433.0 329 65.3
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 4.8e-119 431.8 331 66.5
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 8.1e-119 431.0 333 65.2
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.4e-118 430.3 331 66.2
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 3.1e-118 429.1 331 65.3
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 4.0e-118 428.7 303 72.9
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 4.0e-118 428.7 329 65.3
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 5.3e-118 428.3 295 71.9
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 7.6e-117 424.5 331 62.8
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 7.6e-117 424.5 331 65.6
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.3e-116 423.7 331 63.1
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.7e-116 423.3 331 64.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 4.9e-116 421.8 329 65.3
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.9e-115 419.9 331 65.6
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 9.3e-115 417.5 334 65.0
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.1e-114 416.4 331 64.4
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 2.1e-114 416.4 331 63.7
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.7e-114 416.0 331 63.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 3.5e-114 415.6 331 64.4
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 6.0e-114 414.8 331 64.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.0e-113 414.1 331 64.4
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.8e-113 413.3 332 64.5
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.1e-112 410.6 331 63.7
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.5e-112 410.2 333 64.3
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.9e-112 409.8 331 62.8
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.9e-112 409.8 331 63.4
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 7.4e-112 407.9 331 63.4
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.3e-111 407.1 331 62.2
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 2.1e-111 406.4 330 61.5
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 6.2e-111 404.8 332 60.8
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 6.2e-111 404.8 334 62.6
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 1.1e-110 404.1 333 62.8
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.1e-110 404.1 335 61.8
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 1.4e-110 403.7 332 60.5
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 3.1e-110 402.5 295 67.8
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 5.3e-110 401.7 371 58.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.2e-109 400.6 332 62.7
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.0e-108 397.5 332 63.0
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.7e-108 396.7 295 66.4
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.1e-106 389.8 351 59.3
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 2.3e-105 386.3 289 67.1
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.2e-101 374.0 333 59.2
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.3e-97 359.8 332 58.4
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 3.2e-91 339.3 331 52.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 1.4e-89 334.0 303 56.1
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.1e-83 314.3 252 61.1
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 6.3e-79 298.5 331 47.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.5e-75 286.6 291 53.6
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 2.5e-75 286.6 291 53.6
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.2e-75 285.8 287 50.9
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.3e-71 274.2 333 44.1
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 9.1e-70 268.1 189 71.4
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.2e-69 267.7 189 71.4
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.6e-69 267.3 334 42.2
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 7.0e-62 241.9 333 40.8
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 4.0e-57 226.1 156 71.8
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 8.3e-47 191.8 153 62.7
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.1e-46 189.5 153 60.1
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.2e-45 188.0 167 58.7
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.0e-44 183.3 147 68.0
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 9.5e-43 178.3 145 56.6
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.5e-35 151.8 126 59.5
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.3e-28 131.3 123 62.6
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.1e-28 129.4 90 68.9
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-27 128.3 96 65.6
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.3e-25 120.6 108 55.6
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 7.1e-22 109.0 93 58.1
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.6e-16 89.0 60 71.7
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.9e-07 59.7 49 59.2


User provided reference genes

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