Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 4.0e-53 211.1 100 100.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 4.2e-18 94.7 95 53.7
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 3.0e-16 88.6 75 58.7
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 1.5e-15 86.3 87 50.6
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 3.7e-14 81.6 70 61.4
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 3.7e-14 81.6 75 54.7
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 4.8e-14 81.3 95 45.3
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 2.4e-13 79.0 58 63.8
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 9.0e-13 77.0 98 44.9
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 3.4e-12 75.1 90 47.8
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 3.4e-12 75.1 71 59.2
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 5.8e-12 74.3 64 59.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.7e-11 72.8 86 43.0
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.1e-10 70.1 71 57.7
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.4e-10 69.7 100 40.0
Gohir.A13G053568 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.9e-10 69.3 59 50.8
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.9e-10 69.3 92 42.4
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.2e-10 68.6 94 42.6
Gohir.D13G070950 Gossypium hirsutum HOM05D007842 ORTHO05D009661 4.2e-10 68.2 54 55.6
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 4.2e-10 68.2 53 60.4
Gorai.013G081200 Gossypium raimondii HOM05D007842 ORTHO05D009661 5.5e-10 67.8 54 55.6
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 5.5e-10 67.8 89 40.4
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.1e-09 65.9 57 52.6
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 2.1e-09 65.9 85 44.7
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 2.7e-09 65.5 54 53.7
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 2.7e-09 65.5 69 53.6
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.0e-08 63.5 66 47.0
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 1.5e-07 59.7 62 48.4
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 1.9e-07 59.3 90 40.0
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.5e-07 58.9 67 40.3
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 3.3e-07 58.5 87 35.6
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.3e-07 58.5 97 36.1
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.3e-07 58.5 97 36.1
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 9.6e-07 57.0 58 51.7
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 9.6e-07 57.0 79 41.8
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.6e-06 56.2 86 37.2
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 1.6e-06 56.2 95 32.6
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 2.1e-06 55.8 100 36.0
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 2.8e-06 55.5 100 36.0
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 3.7e-06 55.1 72 41.7
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 6.2e-06 54.3 95 33.7
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 8.2e-06 53.9 49 51.0


User provided reference genes

Program Settings