Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1007 Acer truncatum HOM05D007520 ORTHO05D009417 2.2e-134 482.3 240 100.0
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 1.3e-70 270.4 189 73.5
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 1.1e-64 250.8 180 68.3
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.9e-64 250.0 181 67.4
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.9e-64 250.0 183 69.4
Atru.BG.295.p Acer truncatum HOM05D007520 ORTHO05D009417 5.4e-64 248.4 132 95.5
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 1.6e-63 246.9 183 69.4
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 2.1e-63 246.5 183 69.4
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 3.0e-62 242.7 173 68.8
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 3.9e-62 242.3 181 67.4
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 5.1e-62 241.9 183 66.7
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 6.6e-62 241.5 183 67.8
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 5.6e-61 238.4 181 66.9
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 7.3e-61 238.0 183 65.0
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 1.2e-60 237.3 181 66.9
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.6e-60 236.9 181 68.0
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 3.6e-60 235.7 178 64.6
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 4.7e-60 235.3 185 65.4
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 1.1e-59 234.2 181 65.7
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 2.4e-59 233.0 183 63.4
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 2.2e-57 226.5 173 65.9
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 6.4e-57 224.9 191 58.1
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 6.4e-57 224.9 185 61.1
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 4.2e-56 222.2 184 62.0
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 5.4e-56 221.9 185 63.2
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 5.4e-56 221.9 183 61.7
Lalb_Chr10g0094861 Lupinus albus HOM05D007520 ORTHO05D009417 7.1e-56 221.5 182 61.5
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 9.3e-56 221.1 175 64.0
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.6e-55 220.3 181 62.4
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 2.1e-55 219.9 205 58.5
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 2.7e-55 219.5 185 62.2
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 2.3e-54 216.5 184 59.8
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 3.0e-54 216.1 183 63.4
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 3.0e-54 216.1 184 63.0
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 1.1e-53 214.2 187 59.4
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 1.5e-53 213.8 185 58.9
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 7.3e-53 211.5 185 59.5
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 3.6e-52 209.1 185 58.9
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 4.8e-52 208.8 191 55.0
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 4.8e-52 208.8 197 58.9
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 6.2e-52 208.4 186 57.0
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 8.1e-52 208.0 185 57.3
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 1.1e-51 207.6 186 57.5
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 1.8e-51 206.8 180 61.1
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 1.8e-51 206.8 184 60.3
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 5.3e-51 205.3 197 57.9
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 9.0e-51 204.5 177 60.5
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 2.0e-50 203.4 197 58.4
FAN22G1570 Fragaria x ananassa HOM05D000296 ORTHO05D000175 1.3e-49 200.7 190 54.7
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.7e-49 200.3 191 60.2
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 2.2e-49 199.9 173 61.3
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 2.9e-49 199.5 193 59.6
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 4.9e-49 198.7 212 53.3
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 1.4e-48 197.2 186 56.5
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 2.4e-48 196.4 186 55.9
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 7.1e-48 194.9 188 55.9
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 7.1e-48 194.9 182 50.0
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 9.3e-48 194.5 122 78.7
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 1.2e-47 194.1 182 57.1
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 2.7e-47 193.0 150 65.3
Lsat_1_v5_gn_5_170921 Lactuca sativa HOM05D007520 ORTHO05D009417 3.9e-46 189.1 161 59.0
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 9.6e-45 184.5 134 67.9
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 9.6e-45 184.5 134 67.9
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 3.7e-44 182.6 185 51.4
Dinv08902 Davidia involucrata HOM05D007520 ORTHO05D009417 5.3e-43 178.7 131 72.5
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 2.6e-42 176.4 176 55.1
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 2.2e-41 173.3 204 49.0
Hma1.2p1_0095F.1_g047530 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 7.1e-40 168.3 232 46.1
CSS0024703 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.6e-39 165.6 178 50.6
DCAR_002655 Daucus carota HOM05D007520 ORTHO05D009417 3.0e-38 162.9 147 58.5
SalBow3G0394 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.6e-37 158.7 114 71.9
SalBow4G2630 Salvia bowleyana HOM05D007520 ORTHO05D009417 5.6e-37 158.7 114 71.9
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 4.8e-36 155.6 139 61.2
Lj3A859T72 Lonicera japonica HOM05D007520 ORTHO05D009417 3.8e-33 146.0 130 62.3
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 4.9e-33 145.6 116 61.2
CSS0003025 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.5e-33 145.2 178 46.1
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 1.4e-32 144.1 111 64.9
GSVIVG01011596001 Vitis vinifera HOM05D007520 ORTHO05D009417 2.5e-32 143.3 97 75.3
MSTRG.8107 Avicennia marina HOM05D007520 ORTHO05D009417 9.3e-32 141.4 110 66.4
Cc11_g05730 Coffea canephora HOM05D007520 ORTHO05D009417 9.3e-32 141.4 237 41.8
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 9.3e-32 141.4 111 64.0
SalBow6G7185 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.6e-28 130.6 100 69.0
PGSC0003DMG400013121 Solanum tuberosum HOM05D007520 ORTHO05D009417 1.6e-28 130.6 108 63.0
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 6.3e-28 128.6 129 51.9
Carub.0005s0089 Capsella rubella HOM05D007520 ORTHO05D009417 1.5e-26 124.0 118 54.2
SalBow2G3493 Salvia bowleyana HOM05D007520 ORTHO05D009417 1.7e-25 120.6 88 71.6
CSS0008274 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 4.3e-21 105.9 64 76.6
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 1.3e-20 104.4 76 65.8
Pp3c10_19450 Physcomitrium patens HOM05D007520 ORTHO05D009417 4.8e-20 102.4 180 31.1
HPP92_016406 Vanilla planifolia HOM05D007520 ORTHO05D009417 4.8e-20 102.4 74 67.6
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.3e-20 102.1 75 68.0
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.3e-20 102.1 75 68.0
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 5.3e-19 99.0 75 64.0
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 5.3e-19 99.0 119 47.1
Haze_10814 Corylus avellana HOM05D007520 ORTHO05D009417 1.0e-17 94.7 70 70.0
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 2.9e-17 93.2 80 56.2
Mapoly0059s0009 Marchantia polymorpha HOM05D007520 ORTHO05D009417 1.0e-14 84.7 177 29.9
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 7.2e-08 62.0 58 50.0


User provided reference genes

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