Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.2e-211 740.0 481 100.0
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 6.9e-135 485.0 474 65.8
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 2.9e-133 479.6 423 67.4
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.7e-131 473.0 496 62.1
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 2.7e-131 473.0 498 68.3
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.0e-130 469.5 497 63.4
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.9e-130 469.2 417 72.4
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 6.7e-130 468.4 427 68.9
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 8.7e-130 468.0 464 67.0
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 1.5e-129 467.2 422 71.3
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 4.3e-129 465.7 418 71.5
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 4.3e-129 465.7 484 64.0
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 7.4e-129 464.9 496 61.1
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 7.4e-129 464.9 484 62.8
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.6e-128 463.8 486 64.8
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 3.7e-128 462.6 482 63.7
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 3.7e-128 462.6 490 63.9
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.8e-128 462.2 417 70.7
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 8.2e-128 461.5 439 67.7
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.4e-127 460.7 417 72.9
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.1e-127 459.5 502 62.4
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 3.1e-127 459.5 482 63.3
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 5.3e-127 458.8 500 63.6
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 9.0e-127 458.0 420 71.9
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.0e-126 456.8 485 64.7
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 2.6e-126 456.4 479 65.8
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 5.8e-126 455.3 482 67.2
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 7.6e-126 454.9 416 68.3
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.0e-125 454.5 492 66.7
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 2.2e-125 453.4 426 68.3
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 2.9e-125 453.0 501 63.1
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 5.0e-125 452.2 504 62.9
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 2.5e-124 449.9 423 67.4
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 2.1e-123 446.8 417 65.9
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 3.5e-123 446.0 487 62.4
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.9e-123 444.9 489 64.6
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 4.3e-121 439.1 433 65.6
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 1.6e-120 437.2 483 63.4
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 1.6e-120 437.2 424 67.0
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 3.7e-120 436.0 437 64.8
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 3.7e-120 436.0 433 65.6
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 4.8e-120 435.6 483 63.6
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 4.8e-120 435.6 422 67.5
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 8.2e-120 434.9 379 72.8
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 1.1e-119 434.5 476 60.7
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 1.4e-119 434.1 494 62.3
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 1.5e-118 430.6 479 64.5
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 5.0e-117 425.6 484 64.7
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 8.5e-117 424.9 384 71.4
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 8.5e-117 424.9 473 65.1
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.9e-116 423.7 424 66.3
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 3.2e-116 422.9 489 64.8
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 3.2e-116 422.9 475 65.5
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.2e-115 421.0 484 62.8
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.1e-115 420.2 480 65.0
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 2.7e-115 419.9 484 63.2
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 2.7e-115 419.9 423 65.2
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 7.9e-115 418.3 474 64.1
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 7.9e-115 418.3 482 64.1
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 7.9e-115 418.3 492 62.2
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 6.7e-114 415.2 430 59.8
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 6.7e-114 415.2 420 64.3
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 2.0e-113 413.7 471 63.7
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 2.8e-112 409.8 521 52.8
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 1.1e-111 407.9 674 48.4
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 1.8e-111 407.1 493 62.5
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 4.1e-111 406.0 400 67.2
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 5.3e-111 405.6 492 61.6
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 5.3e-111 405.6 492 61.6
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 6.9e-111 405.2 489 63.6
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 6.9e-111 405.2 416 63.9
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 2.6e-110 403.3 408 64.7
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 7.7e-110 401.7 414 65.0
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 1.3e-109 401.0 476 64.3
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 1.3e-109 401.0 474 62.9
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 1.7e-109 400.6 432 61.3
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 1.4e-108 397.5 425 70.1
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.4e-108 397.5 507 57.4
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.2e-108 396.4 416 63.5
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 4.2e-108 396.0 430 61.4
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 5.1e-106 389.0 478 61.7
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 2.0e-105 387.1 484 57.4
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 7.4e-105 385.2 476 63.2
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 6.3e-104 382.1 486 54.1
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 1.7e-101 374.0 442 58.1
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 1.5e-97 360.9 285 74.4
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 2.8e-96 356.7 430 61.9
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.3e-96 355.5 416 63.2
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 4.1e-95 352.8 497 53.5
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.2e-91 341.3 380 61.3
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 6.3e-88 328.9 285 68.1
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 8.3e-88 328.6 285 67.0
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.4e-87 327.8 420 56.7
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 1.4e-87 327.8 420 56.7
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 4.5e-86 322.8 420 54.0
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 1.6e-83 314.3 422 53.8
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.8e-82 310.8 378 56.3
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.6e-81 307.0 475 50.1
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 3.4e-81 306.6 325 64.9
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 2.7e-78 297.0 479 55.1
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.5e-76 291.2 294 62.6
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 1.2e-75 288.1 281 62.6
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 1.0e-74 285.0 278 65.5
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 1.2e-73 281.6 628 41.7
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 1.2e-73 281.6 298 63.4
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.4e-71 273.9 415 49.9
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 4.3e-68 263.1 348 51.1
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 1.5e-65 254.6 341 56.6
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 4.1e-63 246.5 154 82.5
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 8.6e-61 238.8 476 50.8
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 8.6e-61 238.8 385 52.5
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 2.0e-57 227.6 330 53.6
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 5.6e-52 209.5 363 52.3
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 9.5e-52 208.8 274 67.5
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 2.5e-44 184.1 523 37.7
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 6.0e-38 162.9 103 85.4
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 1.5e-33 148.3 107 71.0
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.0e-33 147.9 119 73.1
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 2.2e-32 144.4 370 31.4
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 2.9e-32 144.1 87 87.4
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 1.4e-31 141.7 374 48.1
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.5e-28 131.7 171 63.7
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 2.5e-28 131.0 193 47.2
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 2.6e-25 120.9 98 91.8
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 1.3e-24 118.6 65 84.6
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 3.0e-21 107.5 60 81.7
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 5.6e-20 103.2 96 82.3
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-19 102.1 150 57.3
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.0e-16 92.4 64 76.6
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 3.8e-16 90.5 62 74.2
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 6.5e-16 89.7 96 58.3
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 2.3e-13 81.3 103 46.6
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 4.3e-12 77.0 88 54.5
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 4.5e-09 67.0 140 33.6
HanXRQChr16g0527591 Helianthus annuus HOM05D005481 ORTHO05D006779 1.7e-08 65.1 43 74.4
C06p31420 Brassica napus HOM05D005481 ORTHO05D006779 2.2e-08 64.7 98 43.9
SEGI_02848 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 1.6e-06 58.5 39 74.4


User provided reference genes

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