Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 7.8e-74 280.4 146 100.0
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 6.3e-31 137.9 128 60.9
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 7.4e-24 114.4 135 48.9
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.3e-23 113.6 141 51.1
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.8e-23 112.5 138 50.0
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.7e-23 112.1 125 52.0
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.4e-22 110.2 126 53.2
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.5e-21 105.1 134 50.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.9e-20 102.4 151 48.3
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 6.5e-20 101.3 134 48.5
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 8.5e-20 100.9 137 43.8
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.4e-19 100.1 136 47.1
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.9e-19 99.8 152 49.3
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 5.5e-19 98.2 152 48.7
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.5e-19 98.2 140 45.0
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 7.2e-19 97.8 141 42.6
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 7.2e-19 97.8 129 45.7
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 9.4e-19 97.4 140 46.4
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 9.4e-19 97.4 127 44.9
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.2e-18 97.1 123 51.2
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.2e-18 97.1 125 44.0
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.6e-18 96.7 132 47.7
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.6e-18 96.7 141 46.1
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 6.1e-18 94.7 126 43.7
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.0e-17 94.0 129 45.7
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-17 93.6 133 46.6
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 3.0e-17 92.4 138 43.5
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.0e-17 92.4 127 44.9
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.9e-17 92.0 137 43.8
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.9e-17 92.0 127 44.1
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 5.2e-17 91.7 151 40.4
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 6.7e-17 91.3 121 40.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.7e-17 91.3 131 43.5
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.8e-17 90.9 119 47.9
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.1e-16 90.5 125 46.4
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-16 90.5 127 40.2
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.5e-16 90.1 131 46.6
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.0e-16 89.7 123 47.2
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.0e-16 89.7 131 45.8
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 3.3e-16 89.0 125 42.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 7.4e-16 87.8 141 41.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.3e-15 87.0 130 49.2
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.7e-15 86.7 128 39.8
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.2e-15 86.3 132 40.2
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 2.8e-15 85.9 112 46.4
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.3e-15 84.7 135 41.5
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 6.3e-15 84.7 127 44.9
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 8.2e-15 84.3 115 44.3
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 8.2e-15 84.3 118 42.4
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 8.2e-15 84.3 136 43.4
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.1e-14 84.0 117 41.9
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.8e-14 83.2 116 44.8
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.4e-14 82.8 129 42.6
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 5.3e-14 81.6 134 41.8
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 7.0e-14 81.3 124 41.1
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 9.1e-14 80.9 116 43.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.2e-13 80.5 130 37.7
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.2e-13 80.5 126 40.5
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.6e-13 80.1 138 38.4
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 2.0e-13 79.7 132 38.6
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 2.0e-13 79.7 135 40.7
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.6e-13 79.3 117 42.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.6e-13 79.3 121 44.6
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 4.5e-13 78.6 104 47.1
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 4.5e-13 78.6 104 47.1
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 4.5e-13 78.6 104 47.1
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.5e-13 78.6 127 42.5
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.5e-13 78.6 119 42.9
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 5.9e-13 78.2 139 38.1
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.0e-12 77.4 114 43.9
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.0e-12 77.4 146 40.4
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.0e-12 77.4 129 41.9
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.7e-12 76.6 127 40.9
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 2.2e-12 76.3 128 38.3
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 3.8e-12 75.5 135 37.8
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 5.0e-12 75.1 130 40.8
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 5.0e-12 75.1 109 43.1
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 6.5e-12 74.7 105 41.0
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 6.5e-12 74.7 119 41.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 1.1e-11 73.9 123 42.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.5e-11 73.6 127 35.4
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.9e-11 73.2 132 41.7
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.9e-11 73.2 111 44.1
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.9e-11 73.2 113 40.7
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 1.9e-11 73.2 124 40.3
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 2.5e-11 72.8 128 39.1
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 4.2e-11 72.0 128 35.2
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 4.2e-11 72.0 112 43.8
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 4.2e-11 72.0 130 45.4
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.5e-11 71.6 126 39.7
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 9.4e-11 70.9 133 38.3
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 1.2e-10 70.5 148 39.2
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.1e-10 69.7 105 44.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 2.1e-10 69.7 131 42.0
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 2.7e-10 69.3 126 34.9
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 2.7e-10 69.3 130 43.1
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 6.1e-10 68.2 124 40.3
FAN25G3656 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.0e-10 67.8 112 40.2
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 8.0e-10 67.8 122 38.5
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 1.0e-09 67.4 125 36.0
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.4e-09 67.0 118 39.0
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.3e-09 66.2 116 38.8
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 4.0e-09 65.5 126 36.5
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 5.2e-09 65.1 124 35.5
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 1.5e-08 63.5 137 35.8
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 2.0e-08 63.2 144 35.4
THA.LOC104806292 Tarenaya hassleriana HOM05D001059 ORTHO05D000873 3.3e-08 62.4 117 40.2
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 3.3e-08 62.4 110 36.4
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 5.7e-08 61.6 125 37.6
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 9.7e-08 60.8 117 35.0
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 9.7e-08 60.8 143 39.9
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 9.7e-08 60.8 156 35.9
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 9.7e-08 60.8 156 35.9
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 9.7e-08 60.8 156 35.9
AT1G30515 Arabidopsis thaliana HOM05D012212 ORTHO05D006213 1.3e-07 60.5 138 34.8
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 1.7e-07 60.1 119 34.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.7e-07 60.1 120 35.0
Eucgr.E02504 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.2e-07 59.7 134 35.1
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 2.8e-07 59.3 146 34.9
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 3.7e-07 58.9 103 42.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 4.8e-07 58.5 127 37.8
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 8.2e-07 57.8 103 37.9
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 8.2e-07 57.8 159 35.2
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 8.2e-07 57.8 135 35.6
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 1.1e-06 57.4 100 35.0
A01p13050 Brassica napus HOM05D005932 ORTHO05D006213 1.1e-06 57.4 132 33.3
BraA01t01247Z Brassica rapa HOM05D005932 ORTHO05D006213 1.1e-06 57.4 132 33.3
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 1.8e-06 56.6 134 33.6
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 3.1e-06 55.8 163 34.4
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 5.3e-06 55.1 118 34.7
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 5.3e-06 55.1 133 34.6


User provided reference genes

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