Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.692 Acer truncatum HOM05D002759 ORTHO05D003290 1.0e-81 306.6 150 100.0
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.8e-17 93.2 93 50.5
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 3.1e-17 92.4 93 50.5
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 4.2e-14 82.0 143 36.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.9e-11 73.2 126 34.9
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 5.7e-11 71.6 93 40.9
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 7.4e-11 71.2 109 36.7
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 2.8e-10 69.3 112 34.8
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 3.7e-10 68.9 108 34.3
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.1e-09 67.4 123 33.3
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.1e-09 67.4 108 34.3
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.1e-09 67.4 112 33.0
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.8e-09 66.6 97 39.2
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 2.4e-09 66.2 108 36.1
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 3.1e-09 65.9 108 35.2
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 4.1e-09 65.5 106 35.8
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 9.1e-09 64.3 109 36.7
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 9.1e-09 64.3 127 33.1
CSS0019427 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.2e-08 63.9 109 34.9
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 1.2e-08 63.9 115 34.8
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.2e-08 63.9 109 33.0
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 1.5e-08 63.5 121 34.7
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 2.6e-08 62.8 109 33.9
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.6e-08 62.8 115 34.8
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 7.7e-08 61.2 111 33.3
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 7.7e-08 61.2 123 30.9
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 1.0e-07 60.8 106 33.0
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.0e-07 60.8 112 33.0
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.3e-07 60.5 104 34.6
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.2e-07 59.7 113 33.6
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 2.9e-07 59.3 111 34.2
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 2.9e-07 59.3 111 32.4
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.5e-07 58.2 123 30.1
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 6.5e-07 58.2 113 32.7
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 8.5e-07 57.8 120 30.8
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-06 57.4 109 30.3
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.4e-06 57.0 109 29.4
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.4e-06 57.0 109 29.4
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.4e-06 57.0 94 36.2
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.9e-06 56.6 109 29.4
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.9e-06 56.6 94 36.2
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.9e-06 56.6 130 30.0
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.9e-06 56.6 111 31.5
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 2.5e-06 56.2 100 33.0
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 2.5e-06 56.2 90 36.7
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 3.2e-06 55.8 127 28.3
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 4.2e-06 55.5 112 32.1
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 7.2e-06 54.7 108 27.8
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 7.2e-06 54.7 116 31.0
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 9.4e-06 54.3 102 31.4
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 9.4e-06 54.3 109 32.1


User provided reference genes

Program Settings