Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.283 Acer truncatum HOM05D000097 ORTHO05D000041 3.1e-72 275.0 136 100.0
Atru.chr12.1131 Acer truncatum HOM05D000097 ORTHO05D000041 1.6e-25 119.8 93 69.9
Atru.chr10.279 Acer truncatum HOM05D000097 ORTHO05D000041 6.3e-25 117.9 127 53.5
Atru.chr10.117 Acer truncatum HOM05D000097 ORTHO05D000041 1.7e-14 83.2 143 36.4
Atru.chr10.99 Acer truncatum HOM05D000097 ORTHO05D000041 1.7e-14 83.2 143 36.4
Atru.chr6.1186 Acer truncatum HOM05D000097 ORTHO05D000041 4.7e-12 75.1 119 44.5
Atru.chr10.280 Acer truncatum HOM05D000097 ORTHO05D000041 3.0e-11 72.4 101 46.5
MD05G1166100 Malus domestica HOM05D000097 ORTHO05D000041 3.0e-11 72.4 105 41.0
Atru.chr10.284 Acer truncatum HOM05D000097 ORTHO05D000041 4.4e-10 68.6 89 48.3
Ciclev10003987m.g Citrus clementina HOM05D000097 ORTHO05D000041 7.4e-10 67.8 88 45.5
RcHm_v2.0_Chr2g0112741 Rosa chinensis HOM05D000097 ORTHO05D000041 7.4e-10 67.8 76 47.4
FvH4_1g20460 Fragaria vesca HOM05D000097 ORTHO05D000041 2.8e-09 65.9 76 46.1
FAN19G2679 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.8e-09 65.9 76 46.1
FAN23G0150 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.8e-09 65.9 76 46.1
Potri.006G062700 Populus trichocarpa HOM05D000097 ORTHO05D000041 2.8e-09 65.9 102 43.1
Potri.006G062900 Populus trichocarpa HOM05D000097 ORTHO05D000041 8.2e-09 64.3 101 41.6
Sabra06G0045400 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-08 63.2 76 48.7
Sabra06G0107800 Salix brachista HOM05D000097 ORTHO05D000041 1.8e-08 63.2 80 48.8
Atru.chr10.109 Acer truncatum HOM05D000097 ORTHO05D000041 3.1e-08 62.4 129 31.0
Atru.chr10.92 Acer truncatum HOM05D000097 ORTHO05D000041 3.1e-08 62.4 129 31.0
Ciclev10014428m.g Citrus clementina HOM05D000097 ORTHO05D000041 3.1e-08 62.4 70 51.4
Ciclev10014877m.g Citrus clementina HOM05D000097 ORTHO05D000041 3.1e-08 62.4 103 36.9
Ah.13g074070 Amaranthus hybridus HOM05D000097 ORTHO05D000041 4.1e-08 62.0 110 35.5
Cpa.g.sc30.154 Carica papaya HOM05D000097 ORTHO05D000041 5.3e-08 61.6 89 44.9
Sabra06G0045500 Salix brachista HOM05D000097 ORTHO05D000041 9.1e-08 60.8 71 50.7
Glyma.15G160400 Glycine max HOM05D000097 ORTHO05D000041 1.2e-07 60.5 69 46.4
QL11p015709 Quercus lobata HOM05D000097 ORTHO05D000041 1.5e-07 60.1 93 39.8
Sabra18G0103500 Salix brachista HOM05D000097 ORTHO05D000041 1.5e-07 60.1 105 41.0
Sabra18G0104000 Salix brachista HOM05D000097 ORTHO05D000041 1.5e-07 60.1 105 41.0
Atru.chr10.107 Acer truncatum HOM05D000097 ORTHO05D000041 2.0e-07 59.7 146 30.1
Atru.chr10.90 Acer truncatum HOM05D000097 ORTHO05D000041 2.0e-07 59.7 146 30.1
Hma1.2p1_0552F.1_g177730 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.4e-07 58.9 90 43.3
Atru.chr10.134 Acer truncatum HOM05D000097 ORTHO05D000041 4.5e-07 58.5 115 31.3
Cpa.g.sc30.149 Carica papaya HOM05D000097 ORTHO05D000041 4.5e-07 58.5 73 46.6
QL11p015794 Quercus lobata HOM05D000097 ORTHO05D000041 7.7e-07 57.8 89 47.2
RcHm_v2.0_Chr4g0399281 Rosa chinensis HOM05D000097 ORTHO05D000041 7.7e-07 57.8 89 42.7
Manes.14G160500 Manihot esculenta HOM05D000097 ORTHO05D000041 1.0e-06 57.4 74 47.3
Dinv09055 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-06 57.0 76 42.1
Solyc02g068670.3 Solanum lycopersicum HOM05D000097 ORTHO05D000041 1.7e-06 56.6 76 44.7
PGSC0003DMG400010440 Solanum tuberosum HOM05D000097 ORTHO05D000041 1.7e-06 56.6 76 44.7
CSS0044034 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.2e-06 56.2 81 43.2
Gohir.D06G147500 Gossypium hirsutum HOM05D000097 ORTHO05D000041 2.2e-06 56.2 85 43.5
Gorai.010G171900 Gossypium raimondii HOM05D000097 ORTHO05D000041 2.2e-06 56.2 85 43.5
Manes.14G165800 Manihot esculenta HOM05D000097 ORTHO05D000041 2.2e-06 56.2 91 40.7
Manes.14G165900 Manihot esculenta HOM05D000097 ORTHO05D000041 2.2e-06 56.2 86 44.2
Atru.chr10.829 Acer truncatum HOM05D000097 ORTHO05D000041 2.9e-06 55.8 70 48.6
Potri.015G125000 Populus trichocarpa HOM05D000097 ORTHO05D000041 2.9e-06 55.8 85 43.5
Sabra15G0139400 Salix brachista HOM05D000097 ORTHO05D000041 2.9e-06 55.8 85 43.5
Atru.chr4.2599 Acer truncatum HOM05D000097 ORTHO05D000041 3.8e-06 55.5 73 43.8
Ciclev10027269m.g Citrus clementina HOM05D000097 ORTHO05D000041 3.8e-06 55.5 102 34.3
VMungo1309G1781 Vigna mungo HOM05D000097 ORTHO05D000041 3.8e-06 55.5 68 47.1
Lj6g0002651 Lotus japonicus HOM05D000097 ORTHO05D000041 5.0e-06 55.1 89 41.6
arahy.Tifrunner.gnm1.ann1.V8Y0XL Arachis hypogaea HOM05D000097 ORTHO05D000041 8.5e-06 54.3 67 47.8
AUR62036274 Chenopodium quinoa HOM05D000097 ORTHO05D000041 8.5e-06 54.3 68 44.1
Hma1.2p1_1005F.1_g246880 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 8.5e-06 54.3 70 50.0
Manes.14G160300 Manihot esculenta HOM05D000097 ORTHO05D000041 8.5e-06 54.3 74 45.9
Oeu029788.1 Olea europaea HOM05D000097 ORTHO05D000041 8.5e-06 54.3 125 32.0
QL11p015433 Quercus lobata HOM05D000097 ORTHO05D000041 8.5e-06 54.3 74 45.9
QL11p015452 Quercus lobata HOM05D000097 ORTHO05D000041 8.5e-06 54.3 89 43.8
QL11p015595 Quercus lobata HOM05D000097 ORTHO05D000041 8.5e-06 54.3 74 45.9


User provided reference genes

Program Settings