Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.265 Acer truncatum HOM05D008511 ORTHO05D010691 1.5e-133 479.6 246 100.0
Potri.001G075700 Populus trichocarpa HOM05D008511 ORTHO05D010691 1.2e-63 247.3 222 61.3
FvH4_3g13150 Fragaria vesca HOM05D008511 ORTHO05D010691 6.4e-60 235.0 234 57.3
Manes.03G071600 Manihot esculenta HOM05D008511 ORTHO05D010691 4.1e-59 232.3 212 59.0
TWI38G1802 Tripterygium wilfordii HOM05D008511 ORTHO05D010691 1.0e-57 227.6 215 57.7
CiPaw.10G106900 Carya illinoinensis HOM05D008511 ORTHO05D010691 2.3e-57 226.5 237 53.2
Prupe.4G119000 Prunus persica HOM05D008511 ORTHO05D010691 2.5e-56 223.0 215 56.3
RcHm_v2.0_Chr5g0021391 Rosa chinensis HOM05D008511 ORTHO05D010691 4.3e-56 222.2 241 53.1
Thecc.02G002800 Theobroma cacao HOM05D008511 ORTHO05D010691 7.3e-56 221.5 263 51.3
Cpa.g.sc30.92 Carica papaya HOM05D008511 ORTHO05D010691 3.6e-55 219.2 208 57.7
Gohir.A12G050000 Gossypium hirsutum HOM05D008511 ORTHO05D010691 4.7e-55 218.8 234 55.1
Haze_05233 Corylus avellana HOM05D008511 ORTHO05D010691 6.2e-55 218.4 223 55.6
FAN21G0240 Fragaria x ananassa HOM05D008511 ORTHO05D010691 1.0e-54 217.6 225 53.8
MD05G1244600 Malus domestica HOM05D008511 ORTHO05D010691 3.4e-53 212.6 229 52.4
Duzib132G0693 Durio zibethinus HOM05D008511 ORTHO05D010691 4.4e-53 212.2 237 52.7
QL11p011849 Quercus lobata HOM05D008511 ORTHO05D010691 4.4e-53 212.2 225 51.6
CANSAT35G2052 Cannabis sativa HOM05D008511 ORTHO05D010691 3.2e-51 206.1 246 48.8
Dinv31195 Davidia involucrata HOM05D008511 ORTHO05D010691 5.4e-51 205.3 224 50.9
FAN16G0518 Fragaria x ananassa HOM05D008511 ORTHO05D010691 4.6e-50 202.2 223 51.6
Gorai.008G051400 Gossypium raimondii HOM05D008511 ORTHO05D010691 6.0e-50 201.8 234 52.1
Gohir.D12G048400 Gossypium hirsutum HOM05D008511 ORTHO05D010691 1.7e-49 200.3 234 51.7
TAR624G0648 Trochodendron aralioides HOM05D008511 ORTHO05D010691 1.8e-46 190.3 239 46.0
CsaV3_1G010050 Cucumis sativus L. HOM05D008511 ORTHO05D010691 4.0e-46 189.1 224 48.2
DCAR_007773 Daucus carota HOM05D008511 ORTHO05D010691 2.7e-42 176.4 245 44.9
Aqoxy2G01550 Aquilegia oxysepala HOM05D008511 ORTHO05D010691 1.0e-41 174.5 215 46.0
Nitab4.5_0000844g0310 Nicotiana tabacum HOM05D008511 ORTHO05D010691 8.6e-41 171.4 219 45.2
Sed0008274 Sechium edule HOM05D008511 ORTHO05D010691 8.6e-41 171.4 211 46.9
ClCG03G004120 Citrullus lanatus HOM05D008511 ORTHO05D010691 3.3e-40 169.5 214 47.7
Nn7g38379 Nelumbo nucifera HOM05D008511 ORTHO05D010691 1.6e-39 167.2 188 48.9
Nitab4.5_0000632g0180 Nicotiana tabacum HOM05D008511 ORTHO05D010691 6.2e-39 165.2 219 45.7
MBI02_g25824_MAGBIO Magnolia biondii HOM05D008511 ORTHO05D010691 1.8e-38 163.7 242 41.7
Sc24g0002900 Simmondsia chinensis HOM05D008511 ORTHO05D010691 2.3e-38 163.3 233 42.1
Oeu010662.1 Olea europaea HOM05D008511 ORTHO05D010691 2.2e-36 156.8 229 42.8
SGA_v2.0_scaffold168G38543 Striga asiatica HOM05D008511 ORTHO05D010691 8.4e-36 154.8 228 40.4
CAN.G809.39 Capsicum annuum HOM05D008511 ORTHO05D010691 1.4e-35 154.1 220 42.7
arahy.Tifrunner.gnm1.ann1.LWVG2R Arachis hypogaea HOM05D008511 ORTHO05D010691 2.4e-35 153.3 266 40.2
Migut.D01193 Erythranthe guttata HOM05D008511 ORTHO05D010691 3.2e-35 152.9 219 41.6
Sabra01G0053200 Salix brachista HOM05D008511 ORTHO05D010691 2.5e-32 143.3 128 57.8
Ca_01975_v3 Cicer arietinum L. HOM05D008511 ORTHO05D010691 3.3e-32 142.9 243 39.9
arahy.Tifrunner.gnm1.ann1.5RH3SU Arachis hypogaea HOM05D008511 ORTHO05D010691 9.6e-32 141.4 265 37.7
HPP92_009504 Vanilla planifolia HOM05D008511 ORTHO05D010691 6.9e-30 135.2 234 37.6
COL.COLO4_16225 Corchorus olitorius HOM05D008511 ORTHO05D010691 1.4e-27 127.5 134 51.5
Cfa001274 Carpinus fangiana HOM05D008511 ORTHO05D010691 2.5e-24 116.7 117 53.0
Sopen02g026560 Solanum pennellii HOM05D008511 ORTHO05D010691 1.3e-20 104.4 128 44.5
Solyc02g081930.3 Solanum lycopersicum HOM05D008511 ORTHO05D010691 7.1e-19 98.6 124 44.4
ATR0763G254 Amborella trichopoda HOM05D008511 ORTHO05D010691 7.6e-13 78.6 181 33.7
PGSC0003DMG402007333 Solanum tuberosum HOM05D008511 ORTHO05D010691 9.3e-11 71.6 75 53.3
SalBow3G2667 Salvia bowleyana HOM05D008511 ORTHO05D010691 1.2e-10 71.2 109 42.2


User provided reference genes

Program Settings