Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 7.5e-178 627.1 321 100.0
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 4.5e-122 441.8 239 93.7
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 3.1e-99 365.9 237 75.1
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 8.2e-92 341.3 237 71.3
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 1.1e-91 340.9 273 63.7
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 3.1e-91 339.3 273 63.4
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 3.1e-91 339.3 237 68.4
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 4.1e-91 339.0 237 70.5
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 1.2e-90 337.4 237 69.2
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 3.5e-90 335.9 237 70.5
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 5.9e-90 335.1 237 68.8
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 5.9e-90 335.1 236 67.4
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 1.3e-89 334.0 237 68.8
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 2.2e-89 333.2 237 68.8
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 2.9e-89 332.8 236 69.5
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 3.8e-89 332.4 237 69.2
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 1.1e-88 330.9 237 69.6
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 7.2e-88 328.2 239 68.2
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 1.2e-87 327.4 239 68.6
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 1.2e-87 327.4 237 67.5
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 1.6e-87 327.0 242 66.9
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 1.6e-87 327.0 274 59.1
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 2.1e-87 326.6 246 67.1
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 2.7e-87 326.2 239 67.4
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 2.7e-87 326.2 237 69.2
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 1.0e-86 324.3 246 67.1
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 3.0e-86 322.8 235 66.8
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 3.9e-86 322.4 237 65.8
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 5.2e-86 322.0 237 67.1
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 5.7e-85 318.5 246 66.3
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 5.7e-85 318.5 242 65.3
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 6.3e-84 315.1 275 57.1
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 3.1e-83 312.8 246 63.8
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 9.1e-83 311.2 218 70.6
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.5e-82 309.3 237 64.1
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 5.9e-82 308.5 238 65.1
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 7.7e-82 308.1 242 65.7
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 7.7e-82 308.1 237 65.4
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 1.0e-81 307.8 237 62.9
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 1.0e-81 307.8 237 62.9
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 2.9e-81 306.2 237 63.7
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 3.8e-81 305.8 239 61.5
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.8e-81 305.8 237 63.7
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 5.0e-81 305.4 237 63.7
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.0e-81 305.4 237 63.7
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 6.5e-81 305.1 237 63.7
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 6.5e-81 305.1 235 65.1
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 1.1e-80 304.3 223 66.8
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 5.5e-80 302.0 237 62.0
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 5.5e-80 302.0 243 64.2
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 2.7e-79 299.7 237 62.0
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 8.0e-79 298.1 239 60.7
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 8.8e-78 294.7 252 60.3
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.2e-77 294.3 241 58.9
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.2e-77 294.3 241 58.9
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.2e-77 294.3 241 58.9
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 1.7e-76 290.4 238 59.2
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 4.8e-76 288.9 236 59.3
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 4.1e-75 285.8 237 59.9
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 1.6e-74 283.9 245 59.6
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 2.7e-74 283.1 236 58.5
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 3.5e-74 282.7 236 57.6
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 4.5e-74 282.3 236 58.5
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.7e-73 280.4 215 64.7
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 3.8e-73 279.3 237 59.9
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 3.8e-73 279.3 236 60.6
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 5.0e-73 278.9 236 58.9
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 5.0e-73 278.9 237 62.0
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 6.5e-73 278.5 236 56.8
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 6.5e-73 278.5 237 59.5
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 6.5e-73 278.5 216 63.9
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 1.5e-72 277.3 237 59.5
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 3.2e-72 276.2 236 55.9
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 3.2e-72 276.2 236 55.9
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 3.2e-72 276.2 236 55.9
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 1.2e-71 274.2 243 54.3
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 1.6e-71 273.9 237 56.5
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 1.6e-71 273.9 237 56.5
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 2.7e-71 273.1 237 58.2
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 1.4e-70 270.8 237 58.6
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 1.8e-70 270.4 236 54.2
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 1.8e-70 270.4 237 54.9
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 8.3e-68 261.5 237 57.8
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 1.7e-65 253.8 227 58.1
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 2.8e-63 246.5 314 44.9
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 1.5e-61 240.7 239 51.9
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 4.4e-61 239.2 239 51.5
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 1.8e-59 233.8 237 54.0
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 1.2e-55 221.1 236 51.3
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 1.0e-54 218.0 236 47.5
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 4.0e-54 216.1 236 47.0
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 9.2e-51 204.9 241 43.6
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 1.3e-49 201.1 234 47.4
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 1.1e-46 191.4 147 65.3
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 2.0e-45 187.2 245 42.0
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 7.1e-43 178.7 150 56.0
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 1.6e-42 177.6 133 67.7
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 4.1e-35 152.9 245 36.7
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 2.5e-32 143.7 241 37.8
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 2.5e-32 143.7 249 36.9
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 1.6e-31 141.0 105 67.6
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 8.1e-31 138.7 249 34.9
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 8.4e-28 128.6 269 32.3
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 1.3e-23 114.8 240 31.2
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 4.3e-16 89.7 217 28.1
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.3e-09 68.2 57 50.9
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 3.0e-09 67.0 59 50.8
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 1.9e-08 64.3 47 66.0
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 3.7e-07 60.1 52 51.9


User provided reference genes

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