Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2357 Acer truncatum HOM05D006472 ORTHO05D052522 1.1e-38 162.9 89 100.0
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 6.6e-07 57.4 83 47.0
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 8.6e-07 57.0 53 60.4
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 1.5e-06 56.2 75 48.0
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 1.5e-06 56.2 34 88.2
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 1.5e-06 56.2 83 43.4
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 1.9e-06 55.8 31 93.5
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 1.9e-06 55.8 31 93.5
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 1.9e-06 55.8 31 93.5
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 1.9e-06 55.8 87 43.7
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 1.9e-06 55.8 75 46.7
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 2.5e-06 55.5 46 67.4
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 2.5e-06 55.5 36 80.6
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 3.3e-06 55.1 46 69.6
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 3.3e-06 55.1 34 82.4
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 3.3e-06 55.1 34 85.3
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 3.3e-06 55.1 34 85.3
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 3.3e-06 55.1 34 85.3
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 4.3e-06 54.7 87 42.5
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 4.3e-06 54.7 49 63.3
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 4.3e-06 54.7 31 90.3
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 5.6e-06 54.3 83 44.6
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 5.6e-06 54.3 46 67.4
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 5.6e-06 54.3 39 74.4
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 5.6e-06 54.3 39 74.4
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 5.6e-06 54.3 31 90.3
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 7.3e-06 53.9 46 65.2
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 9.5e-06 53.5 83 42.2
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 9.5e-06 53.5 31 87.1


User provided reference genes

Program Settings