Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 7.2e-68 260.4 125 100.0
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 4.1e-39 164.9 122 68.9
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 1.7e-37 159.5 117 68.4
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.7e-37 159.5 123 65.9
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 5.0e-37 157.9 124 64.5
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 8.6e-37 157.1 123 65.9
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 7.2e-36 154.1 130 64.6
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 1.2e-35 153.3 121 63.6
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 1.2e-35 153.3 108 69.4
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.1e-35 152.5 130 63.8
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 3.6e-35 151.8 126 64.3
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 1.0e-34 150.2 118 67.8
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 1.4e-34 149.8 123 59.3
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 1.4e-34 149.8 118 66.9
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 2.3e-34 149.1 117 63.2
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 3.0e-34 148.7 116 69.8
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 4.0e-34 148.3 126 62.7
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 4.0e-34 148.3 126 62.7
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 5.2e-34 147.9 118 65.3
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 6.8e-34 147.5 91 78.0
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 6.8e-34 147.5 119 63.0
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 8.9e-34 147.1 118 64.4
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.2e-33 146.7 118 66.9
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 2.0e-33 146.0 126 62.7
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.6e-33 145.6 118 66.1
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 4.4e-33 144.8 118 61.0
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 5.7e-33 144.4 119 60.5
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 5.7e-33 144.4 119 61.3
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 9.8e-33 143.7 141 52.5
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.3e-32 143.3 118 61.0
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 1.7e-32 142.9 118 61.0
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 3.7e-32 141.7 80 80.0
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 4.9e-32 141.4 123 59.3
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 4.9e-32 141.4 107 62.6
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 4.9e-32 141.4 133 58.6
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 8.3e-32 140.6 122 59.0
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 1.4e-31 139.8 123 59.3
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.4e-31 139.8 131 59.5
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 1.8e-31 139.4 116 60.3
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 2.4e-31 139.0 123 58.5
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 2.4e-31 139.0 122 59.8
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 4.1e-31 138.3 123 60.2
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 5.4e-31 137.9 118 60.2
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 1.6e-30 136.3 123 59.3
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 4.5e-30 134.8 75 82.7
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 5.9e-30 134.4 98 65.3
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 1.7e-29 132.9 123 56.9
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 2.3e-29 132.5 121 57.9
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 2.3e-29 132.5 121 57.9
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 2.3e-29 132.5 121 57.9
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 2.3e-29 132.5 121 57.9
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 2.3e-29 132.5 98 64.3
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 2.9e-29 132.1 121 57.9
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 3.8e-29 131.7 95 64.2
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 5.0e-29 131.3 87 71.3
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 5.0e-29 131.3 122 55.7
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 6.6e-29 131.0 92 66.3
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 8.6e-29 130.6 117 63.2
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 1.5e-28 129.8 122 57.4
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.5e-28 129.8 95 65.3
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 1.9e-28 129.4 121 56.2
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 1.9e-28 129.4 92 70.7
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 2.5e-28 129.0 122 57.4
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 2.5e-28 129.0 119 56.3
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 5.6e-28 127.9 75 77.3
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 5.6e-28 127.9 122 55.7
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 1.2e-27 126.7 86 67.4
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 2.1e-27 125.9 97 63.9
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 6.1e-27 124.4 153 49.0
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 6.1e-27 124.4 114 57.0
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 8.0e-27 124.0 122 54.1
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 8.0e-27 124.0 120 54.2
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 1.0e-26 123.6 101 62.4
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.3e-26 122.5 122 54.9
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 2.3e-26 122.5 94 64.9
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 3.0e-26 122.1 93 68.8
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 4.0e-26 121.7 75 76.0
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 5.2e-26 121.3 118 56.8
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 5.2e-26 121.3 90 66.7
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 8.9e-26 120.6 80 71.2
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 8.9e-26 120.6 76 78.9
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.0e-25 119.4 75 76.0
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 3.4e-25 118.6 75 74.7
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 7.5e-25 117.5 75 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.7e-24 116.3 75 72.0
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 1.7e-24 116.3 84 65.5
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 3.7e-24 115.2 75 74.7
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.1e-23 113.6 133 50.4
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 6.0e-22 107.8 75 69.3
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 7.8e-22 107.5 73 68.5
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 5.6e-20 101.3 83 62.7
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.8e-19 99.0 84 60.7
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 4.7e-19 98.2 99 54.5
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 1.5e-17 93.2 95 54.7
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.2e-16 89.4 114 53.5
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 1.1e-15 87.0 70 60.0
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 2.1e-14 82.8 119 42.9
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 5.2e-10 68.2 40 75.0
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 6.8e-10 67.8 48 70.8
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.5e-09 66.6 41 70.7


User provided reference genes

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