Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2217 Acer truncatum HOM05D007941 ORTHO05D010050 0.0e+00 1364.7 719 100.0
Ciclev10017854m.g Citrus clementina HOM05D007941 ORTHO05D010050 3.5e-244 848.6 727 66.2
Thecc.06G220000 Theobroma cacao HOM05D007941 ORTHO05D010050 1.3e-233 813.5 734 62.0
Haze_06797 Corylus avellana HOM05D007941 ORTHO05D010050 1.3e-230 803.5 727 63.4
QL05p073215 Quercus lobata HOM05D007941 ORTHO05D010050 6.5e-230 801.2 729 63.2
Cfa000224 Carpinus fangiana HOM05D007941 ORTHO05D010050 6.1e-220 768.1 727 60.7
Potri.004G015401 Populus trichocarpa HOM05D007941 ORTHO05D010050 2.3e-211 739.6 712 60.1
MD05G1345700 Malus domestica HOM05D007941 ORTHO05D010050 1.5e-210 736.9 705 58.6
Manes.16G007400 Manihot esculenta HOM05D007941 ORTHO05D010050 9.7e-210 734.2 738 57.2
Prupe.4G021200 Prunus persica HOM05D007941 ORTHO05D010050 1.7e-209 733.4 712 58.6
Sabra04G0007600 Salix brachista HOM05D007941 ORTHO05D010050 1.8e-208 729.9 717 58.9
Gorai.011G014100 Gossypium raimondii HOM05D007941 ORTHO05D010050 2.4e-208 729.6 725 58.3
COL.COLO4_31770 Corchorus olitorius HOM05D007941 ORTHO05D010050 4.5e-207 725.3 716 59.1
Gohir.D10G012450 Gossypium hirsutum HOM05D007941 ORTHO05D010050 5.0e-206 721.8 725 57.9
MD10G1321100 Malus domestica HOM05D007941 ORTHO05D010050 1.8e-203 713.4 705 58.0
TWI38G0160 Tripterygium wilfordii HOM05D007941 ORTHO05D010050 5.4e-200 701.8 735 54.8
Gohir.A10G012680 Gossypium hirsutum HOM05D007941 ORTHO05D010050 2.0e-199 699.9 725 57.1
RcHm_v2.0_Chr5g0003191 Rosa chinensis HOM05D007941 ORTHO05D010050 5.9e-199 698.4 722 56.1
Cpa.g.sc152.13 Carica papaya HOM05D007941 ORTHO05D010050 1.3e-198 697.2 739 57.9
Nn1g07127 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.4e-195 687.2 752 54.9
TAR627G0026 Trochodendron aralioides HOM05D007941 ORTHO05D010050 1.8e-192 676.8 731 55.0
FAN25G1443 Fragaria x ananassa HOM05D007941 ORTHO05D010050 4.7e-188 662.1 723 52.4
CiPaw.09G091700 Carya illinoinensis HOM05D007941 ORTHO05D010050 8.0e-188 661.4 624 60.1
CANSAT56G1781 Cannabis sativa HOM05D007941 ORTHO05D010050 4.9e-185 652.1 710 55.5
FvH4_3g02100 Fragaria vesca HOM05D007941 ORTHO05D010050 8.3e-185 651.4 677 54.8
Phvul.003G078500 Phaseolus vulgaris HOM05D007941 ORTHO05D010050 6.0e-175 618.6 702 52.7
Glyma.17G013700 Glycine max HOM05D007941 ORTHO05D010050 2.3e-174 616.7 701 52.4
VMungo1215G2837 Vigna mungo HOM05D007941 ORTHO05D010050 1.2e-170 604.4 709 51.2
Lj4g0020812 Lotus japonicus HOM05D007941 ORTHO05D010050 7.6e-170 601.7 707 50.2
Lj1C1230T3 Lonicera japonica HOM05D007941 ORTHO05D010050 1.1e-168 597.8 570 58.4
Actinidia26916 Actinidia chinensis HOM05D007941 ORTHO05D010050 2.4e-168 596.7 736 53.5
PSO832G2769 Papaver somniferum HOM05D007941 ORTHO05D010050 3.2e-168 596.3 660 54.2
Sed0010816 Sechium edule HOM05D007941 ORTHO05D010050 2.4e-160 570.1 708 49.3
CsaV3_1G010790 Cucumis sativus L. HOM05D007941 ORTHO05D010050 1.5e-157 560.8 725 48.3
Cc09_g01710 Coffea canephora HOM05D007941 ORTHO05D010050 6.2e-156 555.4 723 49.0
ClCG03G004750 Citrullus lanatus HOM05D007941 ORTHO05D010050 2.4e-152 543.5 713 46.8
arahy.Tifrunner.gnm1.ann1.CCWF18 Arachis hypogaea HOM05D007941 ORTHO05D010050 5.1e-150 535.8 708 48.0
Ca_21085_v3 Cicer arietinum L. HOM05D007941 ORTHO05D010050 3.1e-147 526.6 708 46.9
MELO3C002458.2 Cucumis melo HOM05D007941 ORTHO05D010050 9.0e-147 525.0 713 46.0
arahy.Tifrunner.gnm1.ann1.N60BY5 Arachis hypogaea HOM05D007941 ORTHO05D010050 3.4e-146 523.1 704 47.2
TPR.G37125 Trifolium pratense HOM05D007941 ORTHO05D010050 5.8e-146 522.3 809 42.6
Solyc03g031660.1 Solanum lycopersicum HOM05D007941 ORTHO05D010050 1.7e-145 520.8 693 48.9
Dinv13890 Davidia involucrata HOM05D007941 ORTHO05D010050 7.9e-143 511.9 491 61.1
Sopen03g005520 Solanum pennellii HOM05D007941 ORTHO05D010050 1.1e-141 508.1 694 48.3
Nitab4.5_0012670g0020 Nicotiana tabacum HOM05D007941 ORTHO05D010050 2.0e-138 497.3 653 48.2
Nn1g03523 Nelumbo nucifera HOM05D007941 ORTHO05D010050 1.3e-137 494.6 363 70.5
Peaxi162Scf00502g00214 Petunia axillaris HOM05D007941 ORTHO05D010050 1.1e-133 481.5 706 46.3
GSVIVG01012729001 Vitis vinifera HOM05D007941 ORTHO05D010050 9.0e-131 471.9 423 61.0
PGR004G0641 Punica granatum HOM05D007941 ORTHO05D010050 1.0e-126 458.4 711 44.2
CiPaw.09G091500 Carya illinoinensis HOM05D007941 ORTHO05D010050 8.7e-126 455.3 424 60.8
FAN21G2241 Fragaria x ananassa HOM05D007941 ORTHO05D010050 5.3e-123 446.0 359 65.5
CDE05G3547 Ceratophyllum demersum HOM05D007941 ORTHO05D010050 7.2e-120 435.6 494 52.0
Nitab4.5_0007864g0050 Nicotiana tabacum HOM05D007941 ORTHO05D010050 1.1e-117 428.3 661 44.2
AUR62012706 Chenopodium quinoa HOM05D007941 ORTHO05D010050 4.3e-117 426.4 595 46.1
EL10Ac8g20054 Beta vulgaris HOM05D007941 ORTHO05D010050 2.7e-111 407.1 638 44.7
Hma1.2p1_0749F.1_g212520 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 4.5e-106 389.8 207 88.4
Hma1.2p1_0749F.1_g212543 Hydrangea macrophylla HOM05D007941 ORTHO05D010050 4.5e-106 389.8 207 88.4
Medtr4g132080 Medicago truncatula HOM05D007941 ORTHO05D010050 1.4e-102 378.3 488 47.5
Mapoly0124s0009 Marchantia polymorpha HOM05D007941 ORTHO05D010050 1.2e-93 348.6 424 50.0
Pp3c25_7620 Physcomitrium patens HOM05D007941 ORTHO05D010050 7.7e-90 335.9 399 49.1
MBI02_g07163_MAGBIO Magnolia biondii HOM05D007941 ORTHO05D010050 8.3e-68 262.7 299 54.5
Glyma.07G260250 Glycine max HOM05D007941 ORTHO05D010050 9.5e-56 222.6 361 42.9
Dinv20049 Davidia involucrata HOM05D007941 ORTHO05D010050 1.8e-54 218.4 211 60.7
AUR62021948 Chenopodium quinoa HOM05D007941 ORTHO05D010050 2.5e-40 171.4 245 46.9
SEGI_08485 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 1.4e-38 165.6 278 43.5
Dinv20048 Davidia involucrata HOM05D007941 ORTHO05D010050 5.6e-32 143.7 294 40.1
SEGI_17062 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 2.1e-31 141.7 70 90.0
ATR0794G083 Amborella trichopoda HOM05D007941 ORTHO05D010050 7.6e-29 133.3 255 40.4
SEGI_18097 Sequoiadendron giganteum HOM05D007941 ORTHO05D010050 3.0e-25 121.3 301 33.2
FAN21G0178 Fragaria x ananassa HOM05D007941 ORTHO05D010050 5.1e-25 120.6 185 42.2
AUR62021949 Chenopodium quinoa HOM05D007941 ORTHO05D010050 8.7e-25 119.8 320 34.7
ATR0794G095 Amborella trichopoda HOM05D007941 ORTHO05D010050 1.5e-21 109.0 211 42.2
PSO210G6634 Papaver somniferum HOM05D007941 ORTHO05D010050 2.8e-15 88.2 126 41.3
Medtr4g132090 Medicago truncatula HOM05D007941 ORTHO05D010050 4.5e-13 80.9 158 40.5
PGSC0003DMG400005076 Solanum tuberosum HOM05D007941 ORTHO05D010050 2.7e-10 71.6 181 34.8
Nn1g03524 Nelumbo nucifera HOM05D007941 ORTHO05D010050 2.4e-06 58.5 118 41.5
Actinidia05517 Actinidia chinensis HOM05D007941 ORTHO05D010050 5.3e-06 57.4 84 45.2


User provided reference genes

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