Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2191 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-38 161.8 95 100.0
Atru.chr7.437 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-32 142.5 77 90.9
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-23 112.5 66 77.3
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-21 106.3 66 75.8
Atru.chr13.2624 Acer truncatum HOM05D000002 ORTHO05D000001 5.0e-21 104.4 77 66.2
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 6.1e-19 97.4 74 66.2
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-17 92.8 54 81.5
Hma1.2p1_0786F.1_g217740 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-11 71.6 64 53.1
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-10 69.7 64 51.6
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.8e-10 67.0 59 50.8
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 1.2e-09 66.6 67 50.7
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.7e-09 64.3 65 50.8
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.8e-09 63.5 69 52.2
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.8e-09 63.5 69 52.2
Hma1.2p1_0717F.1_g208250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-08 63.2 56 55.4
Hma1.2p1_2472F.1_g322770 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-08 63.2 56 55.4
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.2 64 43.8
Atru.chr3.1003 Acer truncatum HOM05D000002 ORTHO05D000001 4.9e-08 61.2 54 53.7
Hma1.2p1_0172F.1_g076200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-08 61.2 60 50.0
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 6.3e-08 60.8 55 45.5
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 60.1 64 43.8
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 59.7 64 46.9
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-07 59.7 69 46.4
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-07 58.9 58 48.3
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-07 58.9 64 42.2
SHI03003 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-07 58.5 64 46.9
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-07 58.5 64 42.2
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-07 58.5 64 42.2
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-07 57.8 64 46.9
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-07 57.8 64 45.3
Atru.chr1.1128 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-06 56.6 59 47.5
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 1.2e-06 56.6 42 54.8
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 1.6e-06 56.2 60 45.0
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.6e-06 56.2 62 40.3
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 56.2 59 45.8
Migut.O00008 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-06 55.5 46 45.7
COL.COLO4_28232 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.5e-06 54.7 54 50.0
Hma1.2p1_0179F.1_g079390 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-06 54.3 49 49.0


User provided reference genes

Program Settings