Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 5.1e-207 724.2 363 100.0
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 9.1e-172 607.1 362 83.7
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.7e-165 586.3 362 78.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 8.2e-165 583.9 363 80.4
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 3.1e-164 582.0 362 80.7
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 4.1e-164 581.6 362 79.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 7.0e-164 580.9 360 79.7
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.6e-163 578.9 362 78.7
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.3e-162 576.6 361 78.7
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.2e-162 575.9 362 79.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 5.0e-162 574.7 361 78.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.5e-161 573.2 361 77.6
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 5.5e-161 571.2 361 77.8
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.2e-160 570.1 362 77.9
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.1e-160 569.3 361 77.6
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 3.6e-160 568.5 362 77.9
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 6.1e-160 567.8 362 78.2
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 6.7e-159 564.3 361 77.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.7e-157 559.7 365 74.5
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 3.7e-157 558.5 362 77.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.4e-156 556.6 366 76.0
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.4e-156 556.6 366 76.0
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.8e-156 556.2 362 75.1
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 4.5e-155 551.6 365 74.8
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.2e-154 549.3 361 73.7
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.2e-154 549.3 365 74.8
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.8e-154 548.5 362 74.0
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 8.5e-154 547.4 361 74.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-153 547.0 364 74.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.2e-153 545.4 338 81.4
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 3.2e-153 545.4 361 73.1
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 9.4e-153 543.9 364 74.2
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.7e-152 542.3 364 73.1
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 8.0e-152 540.8 361 72.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.3e-151 539.3 361 72.6
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.3e-151 539.3 363 71.9
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 8.8e-151 537.3 356 76.4
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.2e-150 537.0 361 74.2
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.2e-150 537.0 328 79.6
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.5e-150 536.6 379 72.0
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.6e-150 535.8 361 73.4
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 4.4e-150 535.0 359 71.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 4.4e-150 535.0 364 72.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 5.7e-150 534.6 345 76.5
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 7.5e-150 534.3 365 73.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.2e-149 532.7 371 70.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 3.7e-149 531.9 356 74.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 3.7e-149 531.9 356 74.7
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.4e-148 530.0 365 72.9
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.4e-148 529.3 359 70.8
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 5.4e-148 528.1 366 72.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.2e-147 526.9 360 70.8
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.6e-147 526.6 356 73.9
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.6e-147 526.6 356 74.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.7e-147 525.8 339 77.0
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.5e-147 525.4 361 70.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 2.9e-146 522.3 356 74.2
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 3.8e-146 521.9 362 72.1
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 8.6e-146 520.8 356 73.3
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 8.6e-146 520.8 356 73.3
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 8.6e-146 520.8 360 71.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 8.6e-146 520.8 360 70.3
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 8.6e-146 520.8 361 72.3
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 8.6e-146 520.8 359 71.3
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.1e-145 520.4 355 71.8
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.9e-145 519.6 355 72.4
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.9e-145 519.6 379 70.2
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 4.2e-145 518.5 355 72.1
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.6e-144 516.5 357 73.4
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.8e-144 515.8 350 71.1
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.6e-144 515.4 361 71.5
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.8e-143 513.1 370 67.8
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.0e-143 512.3 359 70.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.0e-143 511.9 347 74.1
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 5.2e-143 511.5 356 72.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 3.4e-142 508.8 368 70.1
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.3e-141 506.9 358 70.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.2e-141 506.1 356 71.1
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 2.2e-141 506.1 362 72.7
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.7e-141 505.4 362 69.6
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 8.3e-141 504.2 362 69.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.4e-140 503.4 368 68.2
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.1e-140 501.9 361 69.3
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.5e-139 498.8 436 61.2
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.5e-137 493.4 355 68.5
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.5e-137 493.4 362 65.7
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.5e-137 493.4 362 68.2
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.9e-137 493.0 339 73.2
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.5e-137 492.7 313 78.0
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 4.3e-137 491.9 363 70.0
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 7.3e-137 491.1 337 73.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 6.8e-135 484.6 323 74.6
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.9e-133 479.2 360 65.0
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.2e-131 473.8 359 63.5
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.7e-130 469.9 361 64.3
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.0e-130 469.2 405 62.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 6.6e-130 468.0 289 79.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.1e-129 467.2 425 60.0
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 7.3e-129 464.5 287 79.4
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 8.9e-127 457.6 358 64.2
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 8.3e-125 451.1 312 71.5
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.0e-122 444.1 274 81.0
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 6.6e-122 441.4 287 76.3
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 8.6e-122 441.0 274 79.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.7e-117 426.8 302 74.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 4.3e-113 412.1 309 66.0
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.2e-109 399.8 359 57.1
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.7e-106 390.2 350 56.9
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 4.0e-103 379.0 358 54.7
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.4e-100 370.5 327 62.1
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.4e-100 369.8 260 71.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 9.3e-100 367.9 266 69.5
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 7.8e-99 364.8 267 66.7
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 6.9e-87 325.1 354 49.2
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.9e-84 317.0 311 51.4
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 2.4e-71 273.5 452 36.9
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-68 264.2 360 45.6
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 6.5e-61 238.8 175 72.0
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-60 237.7 279 52.0
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 1.2e-59 234.6 357 40.1
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.2e-56 223.8 360 39.7
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-55 219.9 240 53.8
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-52 209.1 210 57.1
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.2e-50 202.6 180 62.8
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-49 199.9 180 61.7
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 5.3e-47 192.6 244 48.8
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 1.9e-36 157.5 112 69.6
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 2.2e-24 117.5 125 53.6
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-21 108.6 203 39.4
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 3.1e-18 97.1 70 65.7
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 6.4e-16 89.4 70 62.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 9.2e-15 85.5 49 83.7
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 3.0e-13 80.5 217 27.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 2.6e-09 67.4 35 88.6
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 4.4e-09 66.6 83 44.6


User provided reference genes

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