Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 6.9e-218 760.4 391 100.0
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 1.7e-168 596.3 397 77.6
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 3.2e-162 575.5 379 78.4
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 5.4e-162 574.7 397 75.8
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 1.6e-161 573.2 382 78.0
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 2.0e-161 572.8 406 74.6
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 4.6e-161 571.6 398 76.1
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 1.7e-160 569.7 398 75.9
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 1.5e-159 566.6 384 75.8
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 4.3e-159 565.1 396 75.0
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 5.6e-159 564.7 383 77.0
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 3.6e-158 562.0 398 74.1
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 6.2e-158 561.2 375 76.8
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 6.2e-158 561.2 387 76.2
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 1.0e-157 560.5 387 75.7
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 2.3e-157 559.3 398 73.9
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 3.1e-157 558.9 387 74.2
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 4.0e-157 558.5 379 76.3
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 5.2e-157 558.1 375 77.9
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 2.6e-156 555.8 403 73.2
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 3.4e-156 555.4 389 73.0
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 5.8e-156 554.7 379 76.0
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 1.7e-155 553.1 373 75.3
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 1.7e-155 553.1 373 76.9
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 2.9e-155 552.4 428 69.2
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 3.7e-155 552.0 428 69.6
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 1.9e-154 549.7 392 73.0
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 2.4e-154 549.3 395 72.7
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 3.2e-154 548.9 375 74.7
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 5.4e-154 548.1 385 74.3
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 2.0e-153 546.2 387 73.6
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 6.0e-153 544.7 375 74.9
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 1.7e-152 543.1 405 70.9
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 3.0e-152 542.3 404 69.8
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 4.7e-150 535.0 392 74.0
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 4.7e-150 535.0 398 71.9
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 2.3e-149 532.7 383 71.0
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 2.2e-147 526.2 399 71.4
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 3.2e-146 522.3 387 70.8
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 1.7e-144 516.5 391 67.5
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.7e-144 516.5 387 69.5
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 2.3e-144 516.2 374 70.3
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 1.9e-143 513.1 441 65.1
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 2.5e-143 512.7 373 69.4
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 2.5e-143 512.7 387 69.0
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 5.6e-143 511.5 363 70.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 5.6e-143 511.5 287 86.8
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 1.2e-142 510.4 382 68.8
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 2.1e-142 509.6 363 70.5
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 3.6e-142 508.8 391 67.3
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 6.2e-142 508.1 382 69.1
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 6.2e-142 508.1 382 69.1
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 6.2e-142 508.1 287 85.7
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 8.1e-142 507.7 410 68.5
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 4.0e-141 505.4 391 68.3
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 4.0e-141 505.4 389 67.6
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 8.9e-141 504.2 375 71.2
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 1.2e-140 503.8 379 68.6
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.5e-140 503.4 397 68.5
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 1.5e-140 503.4 379 68.9
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 2.6e-140 502.7 370 70.0
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 3.4e-140 502.3 372 70.4
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 3.4e-140 502.3 387 66.9
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 4.4e-140 501.9 387 67.7
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 9.9e-140 500.7 394 66.8
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 1.3e-139 500.4 387 69.3
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 1.3e-139 500.4 387 67.2
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 1.3e-139 500.4 388 66.5
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 2.2e-139 499.6 375 66.4
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 6.4e-139 498.0 391 68.5
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 1.4e-138 496.9 394 67.0
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 7.8e-137 491.1 395 64.1
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 1.3e-136 490.3 404 65.8
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 1.7e-136 490.0 402 63.9
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 1.5e-135 486.9 377 69.2
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 1.9e-135 486.5 287 81.5
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 5.6e-135 485.0 384 64.6
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 1.4e-133 480.3 386 65.8
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 8.9e-133 477.6 313 75.4
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 3.4e-132 475.7 353 69.1
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 9.9e-132 474.2 375 65.6
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 1.3e-131 473.8 369 64.8
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 4.9e-131 471.9 345 70.4
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 4.9e-131 471.9 366 65.3
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 6.4e-131 471.5 387 63.6
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 3.2e-130 469.2 381 64.8
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 9.3e-130 467.6 397 63.2
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 2.1e-129 466.5 395 62.5
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 2.7e-129 466.1 375 65.6
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 1.0e-128 464.2 385 61.8
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 1.0e-128 464.2 370 63.0
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 2.3e-128 463.0 393 63.6
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 3.9e-128 462.2 393 62.6
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 8.7e-128 461.1 377 65.3
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 1.1e-127 460.7 405 60.7
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 2.1e-126 456.4 377 65.0
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 2.1e-126 456.4 374 66.0
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 2.8e-126 456.1 373 66.0
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 2.8e-126 456.1 373 66.0
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 8.1e-126 454.5 374 65.8
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 2.4e-125 453.0 377 64.2
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 5.3e-125 451.8 373 65.7
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 5.3e-125 451.8 396 63.4
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 6.9e-125 451.4 380 63.9
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 3.4e-124 449.1 375 63.7
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 7.6e-124 448.0 388 64.7
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 2.9e-123 446.0 393 63.9
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 3.8e-123 445.7 389 64.0
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 4.9e-123 445.3 381 63.3
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 3.2e-122 442.6 287 76.7
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 5.4e-122 441.8 353 67.7
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 9.3e-122 441.0 379 63.3
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 9.3e-122 441.0 385 62.6
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.7e-120 436.8 386 61.7
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 1.3e-118 430.6 389 61.7
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 3.6e-118 429.1 389 61.4
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 3.6e-118 429.1 355 63.9
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 1.8e-117 426.8 389 61.2
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 1.8e-117 426.8 385 61.6
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 6.9e-117 424.9 392 59.9
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 1.2e-116 424.1 377 56.0
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 2.0e-116 423.3 388 58.5
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 3.4e-116 422.5 369 62.6
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 4.5e-116 422.2 504 48.8
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 9.9e-116 421.0 385 61.6
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 9.9e-116 421.0 385 61.6
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 2.4e-114 416.4 386 60.1
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 7.1e-114 414.8 385 61.3
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 7.1e-114 414.8 385 61.3
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 1.2e-113 414.1 290 65.2
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 2.1e-113 413.3 287 75.3
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 1.3e-112 410.6 385 60.8
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 1.3e-110 404.1 396 55.3
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 3.1e-109 399.4 375 59.5
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 1.6e-105 387.1 289 70.2
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 4.2e-98 362.5 344 54.7
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.5e-95 354.0 251 71.3
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 2.5e-95 353.2 391 49.4
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 1.4e-80 304.3 196 77.6
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 3.6e-57 226.5 293 43.0
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 4.7e-57 226.1 171 67.8
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 1.8e-56 224.2 154 72.1
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 3.0e-56 223.4 303 40.3
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 2.3e-51 207.2 258 47.3
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 3.3e-42 176.8 248 45.6
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 2.6e-31 140.6 189 45.5
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 2.1e-28 131.0 72 86.1
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 6.0e-28 129.4 173 46.8
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 5.2e-24 116.3 143 54.5
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 5.8e-23 112.8 111 57.7
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 4.3e-18 96.7 282 27.7
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 1.2e-17 95.1 114 52.6
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 4.4e-15 86.7 61 68.9


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