Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2137 Acer truncatum HOM05D002065 ORTHO05D002050 2.8e-82 308.5 153 100.0
Ciclev10016810m.g Citrus clementina HOM05D002065 ORTHO05D002050 9.5e-38 160.6 140 57.1
Thecc.06G213400 Theobroma cacao HOM05D002065 ORTHO05D002050 2.0e-35 152.9 141 55.3
Dinv18891 Davidia involucrata HOM05D002065 ORTHO05D002050 4.4e-35 151.8 141 56.0
Prupe.4G027000 Prunus persica HOM05D002065 ORTHO05D002050 1.7e-34 149.8 139 54.0
Dinv20008 Davidia involucrata HOM05D002065 ORTHO05D002050 3.7e-34 148.7 141 55.3
QL05p075313 Quercus lobata HOM05D002065 ORTHO05D002050 4.1e-33 145.2 138 51.4
Duzib235G0538 Durio zibethinus HOM05D002065 ORTHO05D002050 5.4e-33 144.8 139 50.4
MD10G1314100 Malus domestica HOM05D002065 ORTHO05D002050 7.0e-33 144.4 139 51.8
CiPaw.09G085400 Carya illinoinensis HOM05D002065 ORTHO05D002050 9.2e-33 144.1 138 55.1
Gohir.D10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 5.9e-32 141.4 139 49.6
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 5.9e-32 141.4 139 49.6
Gohir.A10G015700 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.7e-31 139.8 139 49.6
MD05G1340600 Malus domestica HOM05D002065 ORTHO05D002050 1.7e-31 139.8 139 51.1
CiPaw.09G086400 Carya illinoinensis HOM05D002065 ORTHO05D002050 3.9e-31 138.7 138 52.9
Hma1.2p1_0729F.1_g209610 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 6.6e-31 137.9 139 50.4
Duzib192G0918 Durio zibethinus HOM05D002065 ORTHO05D002050 1.5e-30 136.7 141 50.4
Gohir.D06G151332 Gossypium hirsutum HOM05D002065 ORTHO05D002050 5.6e-30 134.8 140 50.7
Gorai.010G176400 Gossypium raimondii HOM05D002065 ORTHO05D002050 5.6e-30 134.8 140 50.7
Gohir.A06G144950 Gossypium hirsutum HOM05D002065 ORTHO05D002050 7.3e-30 134.4 140 50.7
FAN25G0723 Fragaria x ananassa HOM05D002065 ORTHO05D002050 8.0e-29 131.0 141 48.9
FAN21G3944 Fragaria x ananassa HOM05D002065 ORTHO05D002050 2.3e-28 129.4 141 48.9
Prupe.4G026900 Prunus persica HOM05D002065 ORTHO05D002050 2.3e-28 129.4 139 47.5
FvH4_3g02720 Fragaria vesca HOM05D002065 ORTHO05D002050 1.5e-27 126.7 137 47.4
Rhsim13G0158100 Rhododendron simsii HOM05D002065 ORTHO05D002050 9.8e-27 124.0 139 46.8
CSS0011359 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 1.1e-25 120.6 141 46.1
Manes.17G029300 Manihot esculenta HOM05D002065 ORTHO05D002050 1.1e-25 120.6 140 47.1
Cpa.g.sc81.25 Carica papaya HOM05D002065 ORTHO05D002050 1.4e-25 120.2 139 47.5
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.4e-25 120.2 140 47.9
TWI38G0471 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 2.4e-25 119.4 139 48.9
Potri.004G023400 Populus trichocarpa HOM05D002065 ORTHO05D002050 4.1e-25 118.6 139 43.9
Gohir.D10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 7.8e-24 114.4 142 40.1
Gorai.011G017500 Gossypium raimondii HOM05D002065 ORTHO05D002050 7.8e-24 114.4 142 40.1
Lj1g0010741 Lotus japonicus HOM05D002065 ORTHO05D002050 1.3e-23 113.6 143 46.2
Gohir.A10G015750 Gossypium hirsutum HOM05D002065 ORTHO05D002050 1.7e-23 113.2 142 38.7
VMungo1215G2268 Vigna mungo HOM05D002065 ORTHO05D002050 1.1e-22 110.5 141 45.4
Medtr7g109260 Medicago truncatula HOM05D002065 ORTHO05D002050 1.5e-22 110.2 141 46.1
Cfa021640 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.9e-22 109.8 123 51.2
Nn1g07008 Nelumbo nucifera HOM05D002065 ORTHO05D002050 2.5e-22 109.4 140 45.0
Psat3g020720 Pisum sativum HOM05D002065 ORTHO05D002050 1.4e-20 103.6 140 46.4
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 1.8e-20 103.2 147 40.1
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 5.2e-20 101.7 121 43.8
MBI18_g40467_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.2e-19 100.5 141 41.1
RcHm_v2.0_Chr5g0004121 Rosa chinensis HOM05D002065 ORTHO05D002050 7.5e-19 97.8 142 38.7
Aqoxy4G02006 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 9.8e-19 97.4 142 39.4
PGR004G0337 Punica granatum HOM05D002065 ORTHO05D002050 8.3e-18 94.4 138 42.8
Actinidia26952 Actinidia chinensis HOM05D002065 ORTHO05D002050 3.2e-17 92.4 113 46.0
Actinidia05537 Actinidia chinensis HOM05D002065 ORTHO05D002050 7.1e-17 91.3 111 46.8
Sabra04G0012800 Salix brachista HOM05D004864 ORTHO05D005393 2.1e-16 89.7 123 40.7
MBI18_g06812_MAGBIO Magnolia biondii HOM05D004864 ORTHO05D002050 3.9e-15 85.5 127 40.2
TPR.G20274 Trifolium pratense HOM05D002065 ORTHO05D002050 8.6e-15 84.3 118 42.4
ATR0794G125 Amborella trichopoda HOM05D002065 ORTHO05D002050 5.6e-14 81.6 135 35.6
ATR0794G057 Amborella trichopoda HOM05D002065 ORTHO05D002050 1.1e-12 77.4 139 33.8
Nn1g03650 Nelumbo nucifera HOM05D002065 ORTHO05D002050 4.4e-11 72.0 148 32.4
CSS0011499 Camellia sinensis var. sinensis HOM05D002065 ORTHO05D002050 7.6e-11 71.2 139 33.1
MBI02_g10994_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 7.1e-09 64.7 127 32.3
DCAR_022527 Daucus carota HOM05D002065 ORTHO05D002050 2.1e-08 63.2 85 40.0
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 2.1e-08 63.2 126 33.3
TAR626G1859 Trochodendron aralioides HOM05D002065 ORTHO05D002050 2.1e-08 63.2 134 29.9
ClCG03G005020 Citrullus lanatus HOM05D002065 ORTHO05D002050 3.5e-08 62.4 84 40.5
Glyma.11G003000 Glycine max HOM05D002065 ORTHO05D002050 7.8e-08 61.2 87 42.5
Hma1.2p1_0729F.1_g209600 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 7.8e-08 61.2 117 32.5
MBI18_g44236_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 7.8e-08 61.2 144 29.9
Cpa.g.c26548.3 Carica papaya HOM05D002065 ORTHO05D002050 2.3e-07 59.7 125 34.4
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 3.0e-07 59.3 125 34.4
TWI38G1319 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 3.0e-07 59.3 131 29.0
TWI39G0180 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 3.0e-07 59.3 104 36.5
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 3.0e-07 59.3 125 30.4
Haze_09617 Corylus avellana HOM05D002065 ORTHO05D002050 5.1e-07 58.5 86 37.2
Manes.03G123200 Manihot esculenta HOM05D002065 ORTHO05D002050 6.6e-07 58.2 126 32.5
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 6.6e-07 58.2 76 39.5
Manes.15G076400 Manihot esculenta HOM05D002065 ORTHO05D002050 1.1e-06 57.4 121 31.4
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 1.1e-06 57.4 126 31.7
Actinidia09932 Actinidia chinensis HOM05D002065 ORTHO05D002050 1.5e-06 57.0 96 34.4
CiPaw.11G184100 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.5e-06 57.0 121 33.1
Nn1g03652 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.9e-06 56.6 144 30.6
Oeu007632.1 Olea europaea HOM05D002065 ORTHO05D002050 1.9e-06 56.6 120 33.3
MELO3C002487.2 Cucumis melo HOM05D060685 ORTHO05D002050 2.5e-06 56.2 80 37.5
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 2.5e-06 56.2 133 30.8
Ciclev10009510m.g Citrus clementina HOM05D002065 ORTHO05D002050 3.3e-06 55.8 76 39.5
Gorai.010G253300 Gossypium raimondii HOM05D004864 ORTHO05D005393 3.3e-06 55.8 131 31.3
Hma1.2p1_1869F.1_g306060 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 3.3e-06 55.8 124 33.1
Cfa020412 Carpinus fangiana HOM05D002065 ORTHO05D002050 4.3e-06 55.5 92 33.7
Cfa020411 Carpinus fangiana HOM05D002065 ORTHO05D002050 5.6e-06 55.1 71 43.7
Haze_09616 Corylus avellana HOM05D002065 ORTHO05D002050 5.6e-06 55.1 92 34.8
Glyma.06G269200 Glycine max HOM05D002065 ORTHO05D002050 5.6e-06 55.1 139 34.5
Prupe.4G204400 Prunus persica HOM05D002065 ORTHO05D002050 5.6e-06 55.1 129 37.2
Gohir.D06G212800 Gossypium hirsutum HOM05D004864 ORTHO05D005393 7.3e-06 54.7 131 31.3
Hma1.2p1_1869F.1_g306050 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 7.3e-06 54.7 74 39.2
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 7.3e-06 54.7 131 30.5
MSTRG.14416 Avicennia marina HOM05D002065 ORTHO05D002050 9.6e-06 54.3 126 30.2
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 9.6e-06 54.3 102 35.3


User provided reference genes

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