Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 7.0e-167 590.5 290 100.0
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.1e-143 513.5 288 84.7
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.4e-143 513.1 288 84.7
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 2.4e-143 512.3 288 85.1
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.6e-142 509.6 288 84.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.1e-142 509.2 288 83.0
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 7.8e-142 507.3 288 84.0
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 3.0e-141 505.4 284 85.2
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 5.1e-141 504.6 282 84.8
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.1e-140 503.4 286 85.0
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 7.3e-140 500.7 282 84.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 9.6e-140 500.4 285 83.5
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.8e-139 498.8 282 84.0
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.1e-138 496.9 284 81.3
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.8e-138 496.1 284 83.8
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.8e-138 496.1 284 84.2
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.8e-138 494.2 284 83.5
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.5e-137 493.0 284 82.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 4.9e-136 488.0 284 81.3
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 6.4e-136 487.6 286 80.1
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.9e-135 486.1 282 81.9
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.2e-135 485.3 284 81.0
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 9.3e-135 483.8 290 79.7
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.5e-134 481.9 290 77.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.0e-133 480.3 290 79.3
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 3.0e-133 478.8 284 80.3
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 3.9e-133 478.4 284 77.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.1e-133 478.0 284 79.2
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 8.7e-133 477.2 280 80.4
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.3e-131 473.4 284 79.6
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 2.8e-131 472.2 288 77.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 2.8e-131 472.2 288 75.7
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 3.6e-131 471.9 285 77.9
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.6e-131 471.9 284 76.4
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 3.6e-131 471.9 280 79.3
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 3.6e-131 471.9 284 76.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 4.8e-131 471.5 284 79.9
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.4e-130 469.9 294 76.5
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.8e-130 469.5 288 75.7
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.8e-130 469.5 284 77.8
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.4e-130 469.2 283 77.7
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 2.4e-130 469.2 284 76.4
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 9.0e-130 467.2 288 75.0
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 9.0e-130 467.2 288 75.3
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 9.0e-130 467.2 269 81.8
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.5e-129 466.5 284 75.7
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.0e-129 466.1 284 78.9
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.0e-129 466.1 284 78.9
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.0e-129 466.1 284 78.9
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.6e-129 465.7 268 83.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.6e-129 465.7 284 76.8
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 7.6e-129 464.2 291 75.3
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.3e-128 463.4 288 74.7
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.7e-128 463.0 286 75.5
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 3.8e-128 461.8 284 76.4
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.8e-128 461.8 286 74.8
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.2e-127 458.4 284 77.8
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 9.3e-127 457.2 284 74.6
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.1e-126 456.1 289 73.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.6e-126 454.9 284 75.4
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 7.9e-126 454.1 286 74.5
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.9e-126 454.1 306 71.6
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 7.9e-126 454.1 284 75.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.5e-124 449.9 280 73.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.5e-124 449.1 279 75.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.3e-123 446.8 283 73.5
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.6e-123 445.3 281 74.7
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.4e-122 443.4 283 72.1
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.4e-122 442.6 276 76.4
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 4.0e-122 441.8 270 75.6
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.3e-122 441.4 283 72.1
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 9.0e-122 440.7 329 66.0
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.0e-122 440.7 285 70.9
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 9.0e-122 440.7 279 72.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 9.0e-122 440.7 285 72.6
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.5e-121 439.9 270 74.8
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.5e-121 439.9 270 74.8
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.6e-121 439.1 285 70.9
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.9e-120 435.6 284 70.1
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.9e-119 433.0 287 72.1
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 5.5e-119 431.4 284 69.0
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 3.9e-117 425.2 284 68.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.5e-116 423.3 283 70.3
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 3.3e-116 422.2 274 71.2
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.6e-115 419.9 284 68.0
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 7.6e-113 411.0 245 79.6
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.9e-112 409.1 269 68.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 8.4e-112 407.5 280 66.4
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 3.2e-111 405.6 278 65.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 4.2e-111 405.2 265 71.3
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 6.0e-110 401.4 291 67.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.0e-109 400.6 289 67.5
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.5e-108 396.0 259 71.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.2e-105 387.1 263 70.0
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.3e-104 383.6 281 66.5
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 6.1e-102 374.8 246 70.3
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.8e-101 373.2 239 74.5
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-98 364.0 212 81.6
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 3.9e-85 318.9 263 57.4
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.4e-74 283.9 170 76.5
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 8.0e-70 268.1 259 45.9
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 5.7e-68 261.9 259 49.4
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.1e-66 256.1 258 46.9
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.0e-66 255.0 253 47.8
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.4e-52 209.5 152 66.4
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 9.2e-50 201.4 110 89.1
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.2e-46 188.7 199 51.3
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 2.3e-45 186.8 254 39.8
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 7.5e-44 181.8 301 41.2
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 6.4e-43 178.7 102 80.4
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 5.6e-39 165.6 148 59.5
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.3e-32 144.4 94 68.1
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.6e-32 142.1 95 68.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.5e-31 140.2 77 87.0
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.1e-30 137.1 88 73.9
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 6.9e-21 105.5 67 73.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 8.9e-21 105.1 66 72.7
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 1.3e-06 58.2 38 60.5
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.6e-06 57.8 48 62.5


User provided reference genes

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