Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 3.9e-55 218.0 120 100.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 3.9e-31 138.3 100 69.0
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.9e-31 138.3 104 63.5
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 6.7e-31 137.5 100 68.0
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.1e-30 136.7 110 63.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.5e-30 136.3 119 61.3
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.0e-30 136.0 112 62.5
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 4.4e-30 134.8 119 61.3
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.3e-29 133.3 123 59.3
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 6.3e-29 131.0 76 80.3
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.4e-28 129.8 99 62.6
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.8e-28 129.4 95 61.1
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.4e-28 129.0 99 63.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 3.1e-28 128.6 100 63.0
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 9.1e-28 127.1 95 60.0
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.2e-27 126.7 95 61.1
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.2e-27 126.7 95 64.2
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.6e-27 126.3 109 64.2
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.6e-27 126.3 94 67.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 2.0e-27 125.9 117 57.3
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.0e-27 125.9 101 62.4
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.6e-27 125.6 101 62.4
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.5e-27 125.2 69 84.1
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 3.5e-27 125.2 77 76.6
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.3e-26 123.2 71 74.6
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 1.3e-26 123.2 127 52.8
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.7e-26 122.9 98 63.3
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 77 71.4
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.7e-26 122.9 77 71.4
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.2e-26 122.5 118 55.1
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 2.2e-26 122.5 84 67.9
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.2e-26 122.5 110 56.4
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 2.9e-26 122.1 99 61.6
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.9e-26 122.1 104 59.6
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 2.9e-26 122.1 94 63.8
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 3.8e-26 121.7 98 61.2
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 5.0e-26 121.3 99 62.6
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 6.5e-26 120.9 99 60.6
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.1e-25 120.2 125 56.0
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.1e-25 120.2 98 62.2
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 4.2e-25 118.2 62 82.3
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.5e-25 117.9 89 66.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 7.2e-25 117.5 63 81.0
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 7.2e-25 117.5 78 70.5
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 9.4e-25 117.1 117 49.6
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 9.4e-25 117.1 89 66.3
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 9.4e-25 117.1 89 66.3
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.2e-24 116.7 114 52.6
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.6e-24 116.3 96 58.3
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.6e-24 116.3 93 61.3
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.6e-24 116.3 96 57.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.6e-24 116.3 96 60.4
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.7e-24 115.5 117 48.7
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 3.6e-24 115.2 104 56.7
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.6e-24 115.2 97 59.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.7e-24 114.8 97 62.9
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.7e-24 114.8 100 55.0
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 8.0e-24 114.0 61 80.3
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 8.0e-24 114.0 96 54.2
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.0e-23 113.6 96 62.5
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.0e-23 113.6 96 64.6
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.4e-23 113.2 96 56.2
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.8e-23 112.8 73 71.2
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-23 112.5 92 60.9
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.3e-23 112.5 87 59.8
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 3.0e-23 112.1 73 69.9
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 3.0e-23 112.1 67 71.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.0e-23 112.1 117 49.6
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 4.0e-23 111.7 95 60.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.0e-23 111.7 95 61.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 5.2e-23 111.3 73 61.6
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 5.2e-23 111.3 73 61.6
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 6.7e-23 110.9 94 57.4
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 8.8e-23 110.5 86 61.6
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.2e-22 110.2 65 75.4
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.2e-22 110.2 97 55.7
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.5e-22 109.8 68 75.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 1.5e-22 109.8 95 60.0
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.5e-22 109.8 122 50.8
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.0e-22 109.4 106 55.7
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.0e-22 109.4 59 79.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 2.0e-22 109.4 112 50.9
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 2.0e-22 109.4 94 58.5
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 2.6e-22 109.0 94 58.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 3.3e-22 108.6 95 58.9
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 4.4e-22 108.2 115 51.3
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 5.7e-22 107.8 94 60.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 9.7e-22 107.1 63 74.6
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 2.2e-21 105.9 92 59.8
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.8e-21 104.8 66 66.7
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 6.3e-21 104.4 110 50.0
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 8.3e-21 104.0 91 57.1
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 8.3e-21 104.0 105 50.5
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 3.1e-20 102.1 90 60.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 4.1e-20 101.7 116 50.0
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.5e-19 98.2 65 72.3
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 5.9e-19 97.8 60 73.3
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.3e-18 96.7 53 73.6
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.5e-17 93.2 75 57.3
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.2e-17 91.7 66 62.1
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 3.4e-14 82.0 75 53.3
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 4.4e-14 81.6 65 56.9
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.3e-13 80.1 80 55.0
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 2.0e-06 56.2 29 75.9


User provided reference genes

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