Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 7.1e-110 400.6 201 100.0
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 4.8e-82 308.1 202 78.2
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 4.8e-82 308.1 202 78.2
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.4e-81 305.8 202 77.7
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 5.9e-80 301.2 201 76.1
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 1.9e-78 296.2 205 75.6
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 5.5e-78 294.7 163 85.9
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 3.0e-76 288.9 203 75.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 6.7e-76 287.7 191 77.0
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 6.7e-76 287.7 199 72.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 6.7e-76 287.7 193 74.6
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 1.2e-75 287.0 161 86.3
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.3e-75 285.4 160 85.6
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 3.3e-75 285.4 181 79.6
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.7e-74 283.1 161 84.5
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 2.8e-74 282.3 183 77.6
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 2.8e-74 282.3 172 79.1
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 4.8e-74 281.6 201 72.1
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 4.8e-74 281.6 206 71.4
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 4.8e-74 281.6 206 71.4
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 1.4e-73 280.0 193 74.1
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.8e-73 279.6 164 81.7
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 3.1e-73 278.9 167 79.0
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 4.1e-73 278.5 164 84.8
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 7.0e-73 277.7 171 77.2
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 9.1e-73 277.3 168 82.1
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 9.1e-73 277.3 161 82.0
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.6e-72 276.6 182 74.7
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 2.0e-72 276.2 160 83.1
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.7e-72 275.8 167 79.6
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 4.5e-72 275.0 165 79.4
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 5.9e-72 274.6 167 79.0
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 5.9e-72 274.6 163 80.4
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.0e-71 273.9 163 84.0
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 1.7e-71 273.1 168 78.0
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.7e-71 273.1 153 83.0
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.9e-71 272.3 195 72.3
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 3.8e-71 271.9 153 83.7
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 3.8e-71 271.9 163 83.4
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 5.0e-71 271.6 192 69.3
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 6.5e-71 271.2 157 80.3
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.5e-70 270.0 163 82.2
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 3.2e-70 268.9 179 76.0
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 4.2e-70 268.5 158 79.7
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 9.4e-70 267.3 163 77.9
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.2e-69 266.9 161 82.0
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.2e-69 266.9 163 82.2
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 2.1e-69 266.2 200 68.5
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 3.6e-69 265.4 158 82.3
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 8.0e-69 264.2 157 80.3
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 6.8e-68 261.2 152 82.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 1.5e-67 260.0 150 84.7
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 2.0e-67 259.6 158 81.0
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 5.7e-67 258.1 167 73.7
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 5.7e-67 258.1 150 84.0
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 5.7e-67 258.1 153 80.4
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 5.7e-67 258.1 153 81.7
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 5.7e-67 258.1 153 81.7
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 7.5e-67 257.7 153 81.7
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 3.7e-66 255.4 160 80.6
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 6.3e-66 254.6 153 79.1
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.1e-65 252.3 164 75.6
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 3.1e-65 252.3 154 77.3
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.1e-65 251.9 161 76.4
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 4.1e-65 251.9 174 73.6
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.4e-65 251.5 159 78.0
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.0e-65 251.1 160 75.0
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 2.0e-64 249.6 148 81.8
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 2.7e-64 249.2 162 74.1
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.7e-63 246.5 159 75.5
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.7e-63 246.5 148 79.1
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 3.8e-63 245.4 148 79.7
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 3.3e-62 242.3 190 68.9
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 1.4e-60 236.9 255 54.1
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.8e-60 236.5 138 81.9
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 2.3e-60 236.1 124 89.5
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 5.2e-60 235.0 156 74.4
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 1.2e-59 233.8 185 66.5
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.0e-59 233.0 162 71.6
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 2.0e-59 233.0 158 72.8
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 3.4e-59 232.3 155 72.9
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.7e-59 231.5 156 73.1
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.7e-59 231.5 156 73.1
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.8e-58 229.2 158 70.9
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 3.7e-58 228.8 139 79.9
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 4.1e-57 225.3 159 70.4
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.6e-56 223.4 156 70.5
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.5e-56 222.2 156 67.3
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 1.0e-55 220.7 187 60.4
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.3e-55 220.3 154 67.5
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 2.3e-55 219.5 164 65.2
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 3.8e-55 218.8 163 69.9
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 5.2e-52 208.4 154 63.0
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 8.3e-50 201.1 174 64.9
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 3.5e-48 195.7 196 55.1
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.3e-47 193.7 182 58.2
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.1e-44 184.1 153 64.7
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 7.5e-43 177.9 115 74.8
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.4e-41 172.9 108 74.1
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 2.3e-39 166.4 164 56.1
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 2.3e-39 166.4 97 79.4
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 3.9e-39 165.6 124 69.4
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.6e-38 161.8 150 54.0
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 5.6e-38 161.8 99 82.8
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 1.2e-37 160.6 110 66.4
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 6.8e-36 154.8 162 53.1
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 8.6e-31 137.9 163 41.7
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 7.3e-30 134.8 79 73.4
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 4.7e-29 132.1 149 47.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-20 102.8 72 65.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 3.2e-17 92.8 127 44.9
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.3e-15 86.7 79 60.8
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 8.4e-10 68.2 42 81.0


User provided reference genes

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