Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1354 Acer truncatum HOM05D007093 ORTHO05D008910 1.8e-53 212.2 99 100.0
unitig_899.g15158 Utricularia gibba HOM05D007093 ORTHO05D008910 3.3e-15 85.1 67 55.2
TWI60G1187 Tripterygium wilfordii HOM05D007093 ORTHO05D008910 5.6e-15 84.3 58 63.8
Atru.chr6.1376 Acer truncatum HOM05D007093 ORTHO05D008910 1.8e-13 79.3 38 89.5
C02p55490 Brassica napus HOM05D007093 ORTHO05D008910 9.9e-12 73.6 86 44.2
BolC2t11605H Brassica oleracea HOM05D007093 ORTHO05D008910 9.9e-12 73.6 86 44.2
Ciclev10011344m.g Citrus clementina HOM05D007093 ORTHO05D008910 8.3e-11 70.5 37 78.4
ClCG11G005040 Citrullus lanatus HOM05D007093 ORTHO05D008910 7.1e-10 67.4 46 63.0
Dinv11483 Davidia involucrata HOM05D007093 ORTHO05D008910 7.1e-10 67.4 36 77.8
Lj4A116G82 Lonicera japonica HOM05D007093 ORTHO05D008910 9.2e-10 67.0 38 73.7
DCAR_005548 Daucus carota HOM05D007093 ORTHO05D008910 1.6e-09 66.2 38 73.7
SalBow1G5933 Salvia bowleyana HOM05D007093 ORTHO05D008910 2.1e-09 65.9 36 72.2
COL.COLO4_21381 Corchorus olitorius HOM05D007093 ORTHO05D008910 2.7e-09 65.5 37 75.7
MELO3C022059.2 Cucumis melo HOM05D007093 ORTHO05D008910 1.0e-08 63.5 42 61.9
CsaV3_5G038790 Cucumis sativus L. HOM05D007093 ORTHO05D008910 1.3e-08 63.2 37 70.3
QL09p029458 Quercus lobata HOM05D007093 ORTHO05D008910 1.7e-08 62.8 37 70.3
QL09p029436 Quercus lobata HOM05D007093 ORTHO05D008910 2.3e-08 62.4 36 72.2
TPR.G3254 Trifolium pratense HOM05D007093 ORTHO05D008910 8.6e-08 60.5 44 59.1
Prupe.3G247100 Prunus persica HOM05D007093 ORTHO05D008910 1.1e-07 60.1 37 67.6
Cfa007712 Carpinus fangiana HOM05D007093 ORTHO05D008910 1.9e-07 59.3 37 64.9
Nn4g23352 Nelumbo nucifera HOM05D007093 ORTHO05D008910 1.9e-07 59.3 34 70.6
Haze_14367 Corylus avellana HOM05D007093 ORTHO05D008910 2.5e-07 58.9 36 66.7
Rhsim10G0045200 Rhododendron simsii HOM05D007093 ORTHO05D008910 7.3e-07 57.4 36 66.7
TAR622G0743 Trochodendron aralioides HOM05D007093 ORTHO05D008910 7.3e-07 57.4 31 77.4
Phvul.008G024300 Phaseolus vulgaris HOM05D007093 ORTHO05D008910 9.5e-07 57.0 42 57.1
Psat3g194440 Pisum sativum HOM05D007093 ORTHO05D008910 9.5e-07 57.0 43 51.2
VMungo1383G0771 Vigna mungo HOM05D007093 ORTHO05D008910 2.8e-06 55.5 41 53.7
Zm00001eb408510 Zea mays HOM05D007093 ORTHO05D008910 2.8e-06 55.5 36 63.9
CSS0026118 Camellia sinensis var. sinensis HOM05D007093 ORTHO05D008910 3.6e-06 55.1 33 69.7
Ca_06961_v3 Cicer arietinum L. HOM05D007093 ORTHO05D008910 4.7e-06 54.7 42 47.6
Medtr7g017610 Medicago truncatula HOM05D007093 ORTHO05D008910 6.2e-06 54.3 42 50.0
vmacro19123 Vaccinium macrocarpon HOM05D007093 ORTHO05D008910 6.2e-06 54.3 36 61.1


User provided reference genes

Program Settings