Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.980 Acer truncatum HOM05D008758 ORTHO05D009412 3.8e-26 120.9 70 100.0
Atru.chr1.1009 Acer truncatum HOM05D008758 ORTHO05D009412 1.8e-23 112.1 70 91.4
Atru.chr1.977 Acer truncatum HOM05D008758 ORTHO05D009412 1.8e-23 112.1 70 91.4
Atru.chr1.1012 Acer truncatum HOM05D008758 ORTHO05D009412 2.3e-23 111.7 70 92.9
Atru.chr1.1014 Acer truncatum HOM05D008758 ORTHO05D009412 1.1e-22 109.4 65 96.9
Atru.chr1.1011 Acer truncatum HOM05D008758 ORTHO05D009412 3.3e-22 107.8 70 88.6
Atru.chr1.1010 Acer truncatum HOM05D008758 ORTHO05D009412 1.7e-21 105.5 70 88.6
Atru.chr1.978 Acer truncatum HOM05D008758 ORTHO05D009412 4.8e-21 104.0 70 87.1
Atru.chr1.984 Acer truncatum HOM05D008758 ORTHO05D009412 6.7e-15 83.6 50 94.0
TAR376G0113 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.5e-11 71.2 70 60.0
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.5e-11 71.2 70 58.6
TAR291G0003 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.9e-10 68.2 70 58.6
TAR375G0878 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.9e-10 68.2 70 58.6
TAR376G0381 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.8e-10 67.8 70 57.1
TAR376G0225 Trochodendron aralioides HOM05D008758 ORTHO05D009412 8.5e-10 66.6 70 55.7
TAR376G0475 Trochodendron aralioides HOM05D008758 ORTHO05D009412 8.5e-10 66.6 70 57.1
TAR291G0001 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.5e-09 65.9 70 58.6
TAR375G0339 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.5e-09 65.9 70 58.6
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.9e-09 65.5 70 60.0
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 5.5e-09 63.9 70 54.3
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 3.6e-08 61.2 71 56.3
Nn2g15429 Nelumbo nucifera HOM05D008758 ORTHO05D009412 1.8e-07 58.9 72 55.6
Sc11g0009250 Simmondsia chinensis HOM05D008758 ORTHO05D009412 1.8e-07 58.9 70 54.3
PGSC0003DMG400008180 Solanum tuberosum HOM05D008319 ORTHO05D009412 1.2e-06 56.2 70 55.7
Manes.07G005200 Manihot esculenta HOM05D012217 ORTHO05D009412 1.5e-06 55.8 67 52.2
Potri.006G055500 Populus trichocarpa HOM05D010551 ORTHO05D012668 2.6e-06 55.1 68 52.9
EL10Ac3g07002 Beta vulgaris HOM05D024890 ORTHO05D026518 4.4e-06 54.3 70 51.4
Sc25g0005200 Simmondsia chinensis HOM05D008758 ORTHO05D009412 4.4e-06 54.3 62 48.4
Thecc.05G163900 Theobroma cacao HOM05D010551 ORTHO05D012668 5.7e-06 53.9 66 53.0
Nitab4.5_0006284g0040 Nicotiana tabacum HOM05D008319 ORTHO05D009412 7.5e-06 53.5 70 52.9
Potri.006G056000 Populus trichocarpa HOM05D008758 ORTHO05D009412 7.5e-06 53.5 70 54.3
COL.COLO4_28691 Corchorus olitorius HOM05D010551 ORTHO05D012668 9.7e-06 53.1 64 53.1
Thecc.05G163500 Theobroma cacao HOM05D010551 ORTHO05D012668 9.7e-06 53.1 68 51.5


User provided reference genes

Program Settings