Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 3.3e-300 1034.2 520 100.0
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 3.3e-223 778.5 502 77.7
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 1.6e-206 723.0 504 73.0
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 6.2e-206 721.1 495 72.5
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.7e-203 713.0 492 73.2
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 6.4e-203 711.1 501 72.1
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 8.3e-203 710.7 493 72.2
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 6.2e-198 694.5 511 69.1
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 6.4e-195 684.5 481 70.7
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 1.6e-193 679.9 490 70.4
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 2.3e-192 676.0 484 70.0
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.3e-192 676.0 465 71.4
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 5.1e-192 674.9 484 70.2
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 2.3e-184 649.4 481 67.4
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 1.9e-183 646.4 511 64.2
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 3.1e-181 639.0 498 67.7
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 1.6e-177 626.7 510 62.5
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 2.1e-174 616.3 477 63.1
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 2.1e-174 616.3 543 59.5
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 1.1e-173 614.0 462 68.0
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.3e-167 592.0 475 64.2
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 3.8e-163 578.9 489 61.6
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 2.3e-160 569.7 497 60.8
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 3.3e-159 565.8 497 60.4
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 1.6e-158 563.5 492 60.4
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 2.6e-156 556.2 478 59.6
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.4e-146 523.9 380 67.9
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.7e-145 519.6 372 69.9
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 2.2e-139 500.0 481 57.4
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.5e-135 487.3 519 52.2
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 3.2e-130 469.5 482 50.0
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.2e-129 467.6 482 49.8
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 7.5e-127 458.4 519 49.7
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.4e-125 453.4 497 47.1
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 4.5e-124 449.1 498 47.0
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 2.9e-123 446.4 410 58.3
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 3.3e-114 416.4 455 47.5
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 4.3e-114 416.0 349 64.5
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.2e-110 403.7 318 64.5
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 7.5e-103 378.6 299 66.9
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.2e-78 297.4 513 38.4
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 9.6e-66 255.4 182 64.8
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 7.6e-63 245.7 667 30.6
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 4.5e-55 219.9 158 65.8
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 6.9e-48 196.1 228 41.7
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 5.9e-39 166.4 127 73.2
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 7.2e-29 132.9 95 65.3
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.2e-23 115.5 76 72.4
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 3.6e-20 104.0 100 49.0
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 4.8e-17 93.6 68 64.7
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 9.1e-16 89.4 63 58.7
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.2e-14 84.7 81 59.3
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 3.4e-10 70.9 84 45.2
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 2.4e-08 64.7 45 71.1
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 9.1e-08 62.8 61 47.5
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 2.9e-06 57.8 262 22.1
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 3.8e-06 57.4 266 24.4


User provided reference genes

Program Settings