Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.877 Acer truncatum HOM05D006167 ORTHO05D007635 1.9e-30 135.2 67 100.0
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 2.1e-10 68.6 48 72.9
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 2.1e-10 68.6 47 74.5
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 2.1e-10 68.6 48 75.0
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 2.1e-10 68.6 48 75.0
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 2.8e-10 68.2 48 72.9
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 2.8e-10 68.2 49 73.5
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 3.7e-10 67.8 47 74.5
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 8.2e-10 66.6 48 72.9
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 8.2e-10 66.6 48 72.9
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 1.8e-09 65.5 47 70.2
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 3.1e-09 64.7 49 71.4
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 4.0e-09 64.3 48 72.9
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 4.0e-09 64.3 48 72.9
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 4.0e-09 64.3 47 70.2
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 1.5e-08 62.4 47 68.1
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 2.0e-08 62.0 47 68.1
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 2.6e-08 61.6 48 64.6
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.4e-08 61.2 47 68.1
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 4.5e-08 60.8 44 72.7
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 5.8e-08 60.5 73 50.7
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.0e-07 59.7 48 64.6
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.0e-07 59.7 48 64.6
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.3e-07 59.3 48 62.5
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 1.3e-07 59.3 44 72.7
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 3.8e-07 57.8 50 66.0
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 3.8e-07 57.8 44 68.2
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 3.8e-07 57.8 44 68.2
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 3.8e-07 57.8 44 68.2
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 3.8e-07 57.8 47 61.7
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 4.9e-07 57.4 50 64.0
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 4.9e-07 57.4 48 56.2
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 6.5e-07 57.0 47 66.0
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 8.4e-07 56.6 48 60.4
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 59.2
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 59.2
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 59.2
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 59.2
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 59.2
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 1.4e-06 55.8 49 67.3
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 1.4e-06 55.8 48 66.7
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.9e-06 55.5 48 60.4
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 1.9e-06 55.5 49 59.2
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 3.2e-06 54.7 49 59.2
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 3.2e-06 54.7 49 59.2
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 3.2e-06 54.7 49 59.2
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 4.2e-06 54.3 49 59.2
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 4.2e-06 54.3 48 60.4
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.1e-06 53.5 49 61.2
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.1e-06 53.5 49 61.2
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 7.1e-06 53.5 48 62.5
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 7.1e-06 53.5 49 59.2
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 9.3e-06 53.1 48 60.4


User provided reference genes

Program Settings