Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.654 Acer truncatum HOM05D005662 ORTHO05D007004 2.3e-128 462.2 228 100.0
Atru.chr1.651 Acer truncatum HOM05D005662 ORTHO05D007004 1.4e-82 310.1 169 91.7
Ciclev10005797m.g Citrus clementina HOM05D005662 ORTHO05D007004 2.5e-66 256.1 169 75.7
Thecc.03G160400 Theobroma cacao HOM05D005662 ORTHO05D007004 6.3e-62 241.5 166 75.3
TWI39G1176 Tripterygium wilfordii HOM05D005662 ORTHO05D007004 2.4e-61 239.6 167 71.3
CSS0015308 Camellia sinensis var. sinensis HOM05D005662 ORTHO05D007004 1.5e-60 236.9 167 71.9
Gorai.001G237900 Gossypium raimondii HOM05D005662 ORTHO05D007004 1.5e-60 236.9 168 72.0
Prupe.2G281200 Prunus persica HOM05D005662 ORTHO05D007004 1.5e-60 236.9 169 72.2
Actinidia25029 Actinidia chinensis HOM05D005662 ORTHO05D007004 2.0e-60 236.5 170 68.2
Gohir.D07G210500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 4.5e-60 235.3 168 71.4
Gohir.A07G204500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 1.0e-59 234.2 168 72.6
MD07G1257000 Malus domestica HOM05D005662 ORTHO05D007004 1.0e-59 234.2 169 72.8
COL.COLO4_14166 Corchorus olitorius HOM05D005662 ORTHO05D007004 1.3e-59 233.8 169 72.2
vmacro06774 Vaccinium macrocarpon HOM05D005662 ORTHO05D007004 1.1e-58 230.7 167 68.3
Potri.012G128500 Populus trichocarpa HOM05D005662 ORTHO05D007004 1.9e-58 229.9 161 70.2
Manes.06G137000 Manihot esculenta HOM05D005662 ORTHO05D007004 2.5e-58 229.6 170 68.8
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla HOM05D005662 ORTHO05D007004 1.2e-57 227.3 169 70.4
Potri.015G129900 Populus trichocarpa HOM05D005662 ORTHO05D007004 1.2e-57 227.3 165 70.3
MD01G1184800 Malus domestica HOM05D005662 ORTHO05D007004 1.6e-57 226.9 167 70.7
Dinv22971 Davidia involucrata HOM05D005662 ORTHO05D007004 4.7e-57 225.3 165 67.9
Duzib205G1232 Durio zibethinus HOM05D005662 ORTHO05D007004 1.4e-56 223.8 176 70.5
CiPaw.03G096300 Carya illinoinensis HOM05D005662 ORTHO05D007004 6.7e-56 221.5 171 70.2
RcHm_v2.0_Chr1g0374961 Rosa chinensis HOM05D005662 ORTHO05D007004 8.8e-56 221.1 168 70.8
THA.LOC104821401 Tarenaya hassleriana HOM05D005662 ORTHO05D007004 2.0e-55 219.9 168 66.7
GSVIVG01018540001 Vitis vinifera HOM05D005662 ORTHO05D007004 5.7e-55 218.4 165 67.3
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 7.4e-55 218.0 165 64.8
CANSAT56G2670 Cannabis sativa HOM05D005662 ORTHO05D007004 1.7e-54 216.9 169 68.6
FvH4_7g28050 Fragaria vesca HOM05D005662 ORTHO05D007004 3.7e-54 215.7 168 69.0
Dinv28543 Davidia involucrata HOM05D005662 ORTHO05D007004 3.1e-53 212.6 165 65.5
Sopen03g023350 Solanum pennellii HOM05D005662 ORTHO05D007004 5.3e-53 211.8 168 64.9
Thhalv10004861m.g Eutrema salsugineum HOM05D005662 ORTHO05D007004 7.0e-53 211.5 173 67.1
QL09p018886 Quercus lobata HOM05D005662 ORTHO05D007004 7.0e-53 211.5 168 66.1
Carub.0008s2298 Capsella rubella HOM05D005662 ORTHO05D007004 1.2e-52 210.7 171 63.2
Sp2g25490 Schrenkiella parvula HOM05D005662 ORTHO05D007004 1.2e-52 210.7 172 64.5
Solyc03g083540.3 Solanum lycopersicum HOM05D005662 ORTHO05D007004 1.6e-52 210.3 168 64.9
MSTRG.8809 Avicennia marina HOM05D005662 ORTHO05D007004 2.6e-52 209.5 167 64.1
Rhsim03G0170700 Rhododendron simsii HOM05D005662 ORTHO05D007004 1.7e-51 206.8 219 52.5
Lsat_1_v5_gn_8_9401 Lactuca sativa HOM05D005662 ORTHO05D007004 2.2e-51 206.5 164 65.2
TAR374G0299 Trochodendron aralioides HOM05D005662 ORTHO05D007004 2.2e-51 206.5 169 60.9
ECA232G3412 Erigeron canadensis HOM05D005662 ORTHO05D007004 3.8e-51 205.7 166 64.5
Eucgr.K00149 Eucalyptus grandis HOM05D005662 ORTHO05D007004 3.8e-51 205.7 170 63.5
Medtr4g033850 Medicago truncatula HOM05D005662 ORTHO05D007004 8.5e-51 204.5 169 61.5
Nitab4.5_0000481g0050 Nicotiana tabacum HOM05D005662 ORTHO05D007004 8.5e-51 204.5 168 63.7
Nitab4.5_0000072g0480 Nicotiana tabacum HOM05D005662 ORTHO05D007004 1.5e-50 203.8 168 63.1
AL8G39110 Arabidopsis lyrata HOM05D005662 ORTHO05D007004 1.9e-50 203.4 172 61.6
Aqoxy7G00656 Aquilegia oxysepala HOM05D005662 ORTHO05D007004 2.5e-50 203.0 165 60.6
Ca_30761_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 5.5e-50 201.8 170 60.6
DCAR_015743 Daucus carota HOM05D005662 ORTHO05D007004 9.4e-50 201.1 165 61.8
HanXRQChr08g0223561 Helianthus annuus HOM05D005662 ORTHO05D007004 9.4e-50 201.1 161 64.6
MBI12_g31644_MAGBIO Magnolia biondii HOM05D005662 ORTHO05D007004 9.4e-50 201.1 167 59.3
Nn4g26371 Nelumbo nucifera HOM05D005662 ORTHO05D007004 1.2e-49 200.7 167 64.7
Cc02_g04010 Coffea canephora HOM05D005662 ORTHO05D007004 2.1e-49 199.9 167 64.1
PGSC0003DMG400023012 Solanum tuberosum HOM05D005662 ORTHO05D007004 2.1e-49 199.9 162 64.8
Sabra12G0096500 Salix brachista HOM05D005662 ORTHO05D007004 2.7e-49 199.5 146 67.1
AT5G62290 Arabidopsis thaliana HOM05D005662 ORTHO05D007004 8.0e-49 198.0 171 61.4
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea HOM05D005662 ORTHO05D007004 1.0e-48 197.6 169 59.8
A02p42240 Brassica napus HOM05D005662 ORTHO05D007004 1.0e-48 197.6 168 60.1
TAR375G0912 Trochodendron aralioides HOM05D005662 ORTHO05D007004 1.4e-48 197.2 159 61.0
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea HOM05D005662 ORTHO05D007004 1.8e-48 196.8 169 60.4
C02p62090 Brassica napus HOM05D005662 ORTHO05D007004 1.8e-48 196.8 169 60.4
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea HOM05D005662 ORTHO05D007004 3.0e-48 196.1 169 59.8
CARHR276070 Cardamine hirsuta HOM05D005662 ORTHO05D007004 3.0e-48 196.1 173 59.5
TPR.G15119 Trifolium pratense HOM05D005662 ORTHO05D007004 5.2e-48 195.3 169 57.4
Duzib084G0609 Durio zibethinus HOM05D005662 ORTHO05D007004 6.8e-48 194.9 168 64.9
Peaxi162Scf01372g00048 Petunia axillaris HOM05D005662 ORTHO05D007004 6.8e-48 194.9 161 59.0
SGA_v2.0_scaffold2G01165 Striga asiatica HOM05D005662 ORTHO05D007004 1.5e-47 193.7 171 60.8
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea HOM05D005662 ORTHO05D007004 4.4e-47 192.2 169 59.2
BcaB07g29785 Brassica carinata HOM05D005662 ORTHO05D007004 4.4e-47 192.2 173 59.0
Phvul.011G004300 Phaseolus vulgaris HOM05D005662 ORTHO05D007004 1.3e-46 190.7 170 59.4
Lalb_Chr04g0260971 Lupinus albus HOM05D005662 ORTHO05D007004 1.7e-46 190.3 169 58.0
HanXRQChr16g0512531 Helianthus annuus HOM05D005662 ORTHO05D007004 3.7e-46 189.1 168 61.3
SalBow4G2223 Salvia bowleyana HOM05D005662 ORTHO05D007004 3.7e-46 189.1 162 61.7
SalBow4G3324 Salvia bowleyana HOM05D005662 ORTHO05D007004 3.7e-46 189.1 162 61.7
Aa31LG11G1300 Aethionema arabicum HOM05D005662 ORTHO05D007004 8.3e-46 188.0 164 61.6
Migut.F00442 Erythranthe guttata HOM05D005662 ORTHO05D007004 8.3e-46 188.0 167 59.3
Glyma.14G044000 Glycine max HOM05D005662 ORTHO05D007004 8.3e-46 188.0 170 57.1
SGA_v2.0_scaffold486G52387 Striga asiatica HOM05D005662 ORTHO05D007004 8.3e-46 188.0 168 59.5
Psat7g191960 Pisum sativum HOM05D005662 ORTHO05D007004 1.1e-45 187.6 171 58.5
Sed0027239 Sechium edule HOM05D005662 ORTHO05D007004 1.4e-45 187.2 176 58.0
PGR142G0586 Punica granatum HOM05D005662 ORTHO05D007004 5.4e-45 185.3 170 58.8
CDE02G0217 Ceratophyllum demersum HOM05D005662 ORTHO05D007004 9.1e-45 184.5 162 59.9
MELO3C005412.2 Cucumis melo HOM05D005662 ORTHO05D007004 1.2e-44 184.1 173 59.0
HPP92_004603 Vanilla planifolia HOM05D005662 ORTHO05D007004 4.5e-44 182.2 160 60.0
VMungo1127G2067 Vigna mungo HOM05D005662 ORTHO05D007004 4.5e-44 182.2 171 57.9
Glyma.09G233200 Glycine max HOM05D005662 ORTHO05D007004 1.0e-43 181.0 168 57.1
BraA02t09152Z Brassica rapa HOM05D005662 ORTHO05D007004 1.7e-43 180.3 186 54.8
BolC3t18716H Brassica oleracea HOM05D005662 ORTHO05D007004 5.0e-43 178.7 174 57.5
unitig_37.g12504 Utricularia gibba HOM05D005662 ORTHO05D007004 5.0e-43 178.7 166 59.0
Lalb_Chr15g0077021 Lupinus albus HOM05D005662 ORTHO05D007004 8.5e-43 177.9 170 57.1
Lj3g0023650 Lotus japonicus HOM05D005662 ORTHO05D007004 1.5e-42 177.2 177 56.5
Oeu039209.1 Olea europaea HOM05D005662 ORTHO05D007004 1.9e-42 176.8 146 62.3
Cfa008223 Carpinus fangiana HOM05D000922 ORTHO05D007004 7.2e-42 174.9 186 54.8
BraA06t25849Z Brassica rapa HOM05D005662 ORTHO05D007004 6.1e-41 171.8 176 56.2
EL10Ac3g05805 Beta vulgaris HOM05D005662 ORTHO05D007004 8.8e-40 167.9 176 54.0
ATR0733G084 Amborella trichopoda HOM05D005662 ORTHO05D007004 1.2e-39 167.5 165 52.1
ClCG01G005160 Citrullus lanatus HOM05D005662 ORTHO05D007004 2.0e-39 166.8 209 47.8
PSO478G4436 Papaver somniferum HOM05D005662 ORTHO05D007004 2.0e-39 166.8 170 54.7
PSO782G3258 Papaver somniferum HOM05D005662 ORTHO05D007004 2.6e-39 166.4 170 54.7
Sed0014362 Sechium edule HOM05D005662 ORTHO05D007004 1.7e-38 163.7 163 55.8
Os10g0170000 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 2.8e-38 162.9 169 52.1
Hund04625 Selenicereus undatus HOM05D005662 ORTHO05D007004 6.3e-38 161.8 145 56.6
Haze_13835 Corylus avellana HOM05D005662 ORTHO05D007004 3.1e-37 159.5 169 53.8
CAN.G152.22 Capsicum annuum HOM05D005662 ORTHO05D007004 2.5e-34 149.8 136 55.9
C03p64570 Brassica napus HOM05D000207 ORTHO05D001482 7.2e-34 148.3 150 56.0
Ca_00244_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 3.6e-33 146.0 112 64.3
A06p29040 Brassica napus HOM05D000207 ORTHO05D001482 6.8e-32 141.7 151 55.0
Os03g0249300 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 4.4e-31 139.0 167 49.7
SEGI_33447 Sequoiadendron giganteum HOM05D005662 ORTHO05D007004 5.7e-31 138.7 164 47.6
Zm00001eb224250 Zea mays HOM05D005662 ORTHO05D007004 1.3e-30 137.5 167 47.9
BcaC03g18141 Brassica carinata HOM05D000207 ORTHO05D001482 2.7e-28 129.8 128 53.9
Zm00001eb010690 Zea mays HOM05D005662 ORTHO05D007004 2.3e-27 126.7 204 42.2
AUR62016115 Chenopodium quinoa HOM05D005662 ORTHO05D007004 8.0e-25 118.2 115 55.7
DCAR_018618 Daucus carota HOM05D005662 ORTHO05D007004 1.5e-23 114.0 140 46.4
Mapoly0005s0155 Marchantia polymorpha HOM05D005662 ORTHO05D007004 1.5e-23 114.0 165 41.2
Ciclev10006356m.g Citrus clementina HOM05D005662 ORTHO05D007004 2.6e-23 113.2 79 69.6
Ah.13g067330 Amaranthus hybridus HOM05D005662 ORTHO05D007004 4.4e-23 112.5 101 56.4
SMO351G0592 Selaginella moellendorffii HOM05D005662 ORTHO05D007004 4.9e-22 109.0 162 39.5
AUR62035061 Chenopodium quinoa HOM05D005662 ORTHO05D007004 6.4e-22 108.6 98 54.1
Pp3c5_5760 Physcomitrium patens HOM05D005662 ORTHO05D007004 3.5e-20 102.8 170 40.0
Pp3c16_14910 Physcomitrium patens HOM05D005662 ORTHO05D007004 6.0e-20 102.1 168 39.9
CBR_g40194 Chara braunii HOM05D005662 ORTHO05D007004 5.0e-19 99.0 181 37.6
Sc13g0007790 Simmondsia chinensis HOM05D005662 ORTHO05D007004 8.9e-16 88.2 72 68.1
Sabra15G0143400 Salix brachista HOM05D005662 ORTHO05D007004 1.2e-15 87.8 111 45.0
FvH4_3g21360 Fragaria vesca HOM05D005731 ORTHO05D012104 4.4e-15 85.9 86 52.3
DCAR_021652 Daucus carota HOM05D000949 ORTHO05D001276 5.8e-15 85.5 115 43.5
Lsat_1_v5_gn_9_52481 Lactuca sativa HOM05D005662 ORTHO05D007004 2.4e-13 80.1 148 37.8
PSO063G7367 Papaver somniferum HOM05D005662 ORTHO05D007004 4.1e-13 79.3 78 53.8
DCAR_023430 Daucus carota HOM05D005662 ORTHO05D004064 1.2e-12 77.8 67 55.2
AagrBONN_evm.TU.Sc2ySwM_368.1564 Anthoceros agrestis HOM05D005662 ORTHO05D007004 2.1e-12 77.0 75 58.7
Thecc.03G160100 Theobroma cacao HOM05D005662 ORTHO05D007004 8.6e-11 71.6 62 64.5
Cpa.g.sc130.1 Carica papaya HOM05D005662 ORTHO05D007004 4.0e-08 62.8 34 85.3
COL.COLO4_29300 Corchorus olitorius HOM05D005662 ORTHO05D007004 1.5e-07 60.8 67 49.3
Cre12.g538150 Chlamydomonas reinhardtii HOM05D005662 ORTHO05D007004 3.4e-07 59.7 163 28.8
arahy.Tifrunner.gnm1.ann1.8PDC51 Arachis hypogaea HOM05D005662 ORTHO05D007004 7.6e-07 58.5 88 38.6


User provided reference genes

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