Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 5.3e-59 231.1 141 100.0
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 2.1e-52 209.1 141 95.0
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 1.8e-19 99.8 145 44.8
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 6.9e-19 97.8 140 49.3
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 2.2e-17 92.8 139 51.1
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 1.1e-16 90.5 147 51.7
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 4.2e-16 88.6 146 53.4
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.6e-15 86.7 139 54.0
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 3.6e-15 85.5 134 42.5
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 4.7e-15 85.1 140 54.3
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 4.7e-15 85.1 141 37.6
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 6.1e-15 84.7 139 50.4
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 6.1e-15 84.7 135 40.7
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 7.9e-15 84.3 147 38.8
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 7.9e-15 84.3 155 41.9
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 1.8e-14 83.2 153 37.9
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 3.9e-14 82.0 145 36.6
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 6.7e-14 81.3 130 45.4
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.5e-13 80.1 131 44.3
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 5.7e-13 78.2 135 39.3
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 9.7e-13 77.4 147 45.6
Rhsim03G0171400 Rhododendron simsii HOM05D008269 ORTHO05D010153 1.7e-12 76.6 142 35.9
MELO3C005418.2 Cucumis melo HOM05D032672 ORTHO05D010153 2.4e-11 72.8 144 46.5
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 4.1e-11 72.0 146 34.9
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 7.0e-11 71.2 141 40.4
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 7.0e-11 71.2 144 37.5
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 1.2e-10 70.5 148 35.1
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 1.6e-10 70.1 142 36.6
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 2.6e-10 69.3 140 34.3
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 3.5e-10 68.9 160 45.6
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 2.2e-09 66.2 151 46.4
Nn4g26411 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.2e-09 66.2 143 48.3
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 3.8e-09 65.5 158 34.8
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 5.0e-09 65.1 144 30.6
MSTRG.8421 Avicennia marina HOM05D008269 ORTHO05D010153 8.5e-09 64.3 146 41.8
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 1.1e-08 63.9 141 34.8
Eucgr.K03333 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.9e-08 63.2 146 39.7
DCAR_018124 Daucus carota HOM05D008269 ORTHO05D010153 2.5e-08 62.8 142 30.3
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 2.5e-08 62.8 138 34.8
ClCG01G005110 Citrullus lanatus HOM05D032672 ORTHO05D010153 4.2e-08 62.0 139 46.8
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 7.2e-08 61.2 149 31.5
Sed0014961 Sechium edule HOM05D032672 ORTHO05D010153 1.6e-07 60.1 142 37.3
FAN03G2753 Fragaria x ananassa HOM05D008269 ORTHO05D010153 6.1e-07 58.2 62 46.8
Eucgr.K03336 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.4e-06 57.0 62 53.2
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.3e-06 56.2 123 39.0
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.0e-06 55.8 123 37.4
Glyma.20G212300 Glycine max HOM05D008269 ORTHO05D010153 4.0e-06 55.5 140 28.6
C03p03500 Brassica napus HOM05D023982 ORTHO05D010153 5.2e-06 55.1 161 42.2
BolC3t12892H Brassica oleracea HOM05D023982 ORTHO05D010153 5.2e-06 55.1 161 42.2
CARHR264380 Cardamine hirsuta HOM05D012191 ORTHO05D015943 8.8e-06 54.3 40 62.5


User provided reference genes

Program Settings