Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 4.9e-168 594.3 291 100.0
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 8.5e-96 354.4 224 71.0
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 4.7e-94 348.6 234 70.5
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 1.4e-93 347.1 219 74.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 3.0e-93 345.9 226 71.2
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.0e-93 345.9 222 70.3
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 6.7e-93 344.7 221 74.7
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.5e-92 343.6 222 72.5
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 2.6e-92 342.8 223 69.5
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 3.3e-92 342.4 221 71.5
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 4.4e-92 342.0 230 68.3
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 5.7e-92 341.7 217 71.4
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 8.2e-91 337.8 224 69.6
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.4e-90 337.0 221 70.1
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 5.3e-90 335.1 220 70.5
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 5.3e-90 335.1 229 69.9
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 5.3e-90 335.1 225 68.9
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 5.3e-90 335.1 223 70.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.0e-90 334.7 217 69.1
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 7.0e-90 334.7 229 68.6
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.6e-89 333.6 225 68.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.6e-89 332.8 224 70.1
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 3.5e-89 332.4 220 68.6
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 7.7e-89 331.3 221 67.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.0e-88 330.9 224 69.6
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.0e-88 330.9 225 66.2
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.3e-88 330.5 217 69.1
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.7e-88 330.1 217 69.1
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 2.2e-88 329.7 223 73.5
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.5e-87 327.0 220 65.0
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 4.2e-87 325.5 224 67.9
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 9.4e-87 324.3 222 64.9
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.2e-86 323.9 232 66.8
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.6e-86 323.6 218 64.7
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-86 323.6 220 65.5
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 2.1e-86 323.2 222 67.1
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.0e-86 321.2 228 64.5
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.4e-85 320.5 221 66.1
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-85 319.7 225 64.4
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-85 319.7 225 64.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 3.0e-85 319.3 221 65.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 4.0e-85 318.9 218 66.1
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.0e-85 318.9 225 64.9
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.0e-85 318.9 272 57.4
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 5.2e-85 318.5 220 65.9
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 5.2e-85 318.5 226 68.1
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 5.2e-85 318.5 216 65.3
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.2e-84 317.4 220 65.5
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.5e-84 317.0 221 65.6
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.5e-84 317.0 222 65.3
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.5e-84 317.0 236 63.1
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.6e-84 316.2 220 65.0
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 4.4e-84 315.5 226 64.2
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 4.4e-84 315.5 233 66.1
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 5.7e-84 315.1 220 66.4
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 9.7e-84 314.3 229 63.3
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.3e-83 313.9 221 65.6
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.3e-83 313.9 212 67.9
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 2.2e-83 313.2 218 64.7
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 2.2e-83 313.2 218 64.7
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 2.8e-83 312.8 222 64.0
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.8e-83 312.8 228 64.5
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 8.3e-83 311.2 227 63.4
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 8.3e-83 311.2 220 63.2
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.4e-82 309.7 230 64.3
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 3.1e-82 309.3 216 62.5
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 7.0e-82 308.1 212 63.2
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 7.0e-82 308.1 226 66.4
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 9.1e-82 307.8 219 66.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 1.2e-81 307.4 215 65.1
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.0e-81 306.6 219 65.8
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.0e-80 304.3 229 62.9
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.5e-79 298.5 189 72.5
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.2e-78 297.4 214 60.7
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.6e-78 297.0 236 57.6
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.7e-78 296.2 294 51.7
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.0e-76 290.0 227 59.9
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 2.8e-75 286.2 191 73.3
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 8.3e-75 284.6 242 58.3
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.8e-74 283.5 266 52.6
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.8e-74 283.5 192 70.3
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.7e-73 279.6 197 66.5
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 5.9e-73 278.5 220 58.2
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-72 276.6 193 65.8
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.8e-72 275.8 194 65.5
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 2.5e-71 273.1 187 70.6
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 4.7e-70 268.9 186 65.1
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 8.0e-70 268.1 187 66.8
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.8e-69 266.9 225 60.4
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 6.8e-69 265.0 192 64.1
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.5e-68 263.8 187 63.1
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.9e-67 258.8 184 65.8
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.1e-66 257.7 187 64.2
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.1e-66 257.7 194 61.3
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 7.0e-66 255.0 193 61.7
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.2e-65 254.2 183 63.4
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.0e-65 253.4 212 53.8
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.7e-65 253.1 186 62.9
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 4.5e-65 252.3 182 62.6
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 4.5e-65 252.3 183 61.7
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-64 250.4 193 63.2
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-64 250.4 193 63.2
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 5.0e-64 248.8 183 61.2
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.3e-63 245.7 200 60.0
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.1e-62 243.4 224 55.4
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 4.0e-61 239.2 224 56.7
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.0e-60 236.9 220 53.2
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.0e-60 236.9 220 53.2
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 6.4e-59 231.9 190 54.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 4.3e-55 219.2 193 51.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.2e-54 217.6 215 47.4
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 5.1e-48 195.7 156 62.2
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 1.1e-45 188.0 127 65.4
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 1.4e-45 187.6 128 64.1
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 1.9e-34 150.6 81 74.1
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 6.0e-33 145.6 72 77.8
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.9e-18 97.4 186 34.4
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 9.6e-07 58.5 62 40.3


User provided reference genes

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