Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.4e-128 463.0 244 100.0
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 8.5e-81 304.3 244 66.8
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 1.4e-80 303.5 243 67.1
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 2.5e-80 302.8 243 69.5
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 4.2e-80 302.0 243 66.7
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.6e-79 298.5 245 64.5
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 4.6e-79 298.5 240 65.4
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 4.6e-79 298.5 244 62.7
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 1.1e-77 293.9 243 65.0
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.3e-76 290.4 241 67.6
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.8e-76 289.3 244 63.5
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 2.8e-76 289.3 244 64.8
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 2.8e-76 289.3 246 61.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 3.7e-76 288.9 244 67.6
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 8.2e-76 287.7 221 70.1
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 8.2e-76 287.7 244 63.5
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.1e-75 287.3 244 64.3
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.4e-75 287.0 244 68.0
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.1e-75 284.3 244 65.6
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-74 283.9 244 62.7
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.5e-74 283.5 244 67.6
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.5e-74 283.5 239 63.2
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.6e-74 282.7 245 61.2
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.0e-73 280.8 254 58.3
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.3e-73 280.4 244 61.1
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.3e-73 280.4 244 60.7
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 1.7e-73 280.0 237 62.0
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.2e-73 279.6 248 58.9
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 2.9e-73 279.3 238 61.8
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 2.9e-73 279.3 252 59.9
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.0e-73 278.5 245 61.2
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 6.5e-73 278.1 249 62.7
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.1e-72 277.3 253 60.1
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.1e-72 277.3 246 60.6
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.9e-72 276.6 245 58.4
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 2.5e-72 276.2 245 58.8
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 3.2e-72 275.8 246 61.0
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 7.2e-72 274.6 183 73.2
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.6e-71 273.5 244 57.4
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 3.6e-71 272.3 251 57.4
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 4.7e-71 271.9 245 58.4
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 4.7e-71 271.9 245 59.2
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 7.9e-71 271.2 244 58.2
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-70 270.4 237 61.2
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 2.3e-70 269.6 256 57.8
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 3.0e-70 269.2 240 60.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.9e-70 268.9 234 60.3
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.1e-69 267.3 184 70.1
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 2.0e-69 266.5 253 57.7
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.7e-69 264.2 234 59.4
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 9.7e-69 264.2 243 60.5
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 4.8e-68 261.9 247 58.7
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.1e-67 260.8 246 57.3
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.8e-67 260.0 224 61.2
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.8e-67 260.0 256 54.7
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 9.1e-67 257.7 223 60.5
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 9.1e-67 257.7 182 70.9
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.5e-66 256.9 240 56.7
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 4.5e-66 255.4 203 63.1
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 5.9e-66 255.0 253 53.8
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 5.9e-66 255.0 179 69.8
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.2e-65 253.1 226 56.6
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 5.0e-65 251.9 240 55.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 6.5e-65 251.5 235 55.3
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.4e-64 250.4 180 66.7
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.9e-64 250.0 212 59.0
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 7.2e-64 248.1 181 65.7
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.2e-63 247.3 181 65.7
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 3.6e-63 245.7 251 57.8
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 4.7e-63 245.4 181 66.3
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 2.3e-62 243.0 181 64.1
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 3.3e-61 239.2 216 58.3
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 2.2e-60 236.5 217 56.2
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 4.8e-60 235.3 169 67.5
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.2e-58 230.7 185 62.2
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.6e-58 229.6 184 63.6
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-57 227.3 236 53.8
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.8e-57 225.7 244 53.3
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 8.5e-57 224.6 221 55.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 8.5e-57 224.6 221 55.2
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 8.5e-57 224.6 184 56.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 1.5e-56 223.8 221 55.2
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 1.5e-56 223.8 221 55.2
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.5e-56 223.8 182 58.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.9e-56 223.4 218 55.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 5.5e-56 221.9 185 61.1
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 9.4e-56 221.1 185 59.5
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 9.4e-56 221.1 219 54.8
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 9.4e-56 221.1 185 60.5
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.6e-55 220.3 238 51.7
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.3e-54 216.5 140 72.1
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.3e-52 210.7 237 50.2
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.7e-52 210.3 136 73.5
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-51 207.2 176 60.8
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.1e-48 197.6 187 51.9
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.4e-46 190.7 182 51.6
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.8e-46 190.3 184 52.2
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 6.8e-46 188.3 244 48.8
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 3.5e-42 176.0 193 45.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 4.2e-40 169.1 176 46.6
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 8.0e-39 164.9 185 43.8
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.4e-38 164.1 198 46.0
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 3.0e-38 162.9 200 42.0
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.2e-37 161.0 216 42.1
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.7e-36 156.0 227 38.8
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 3.5e-34 149.4 176 51.1
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 5.6e-32 142.1 88 73.9
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 5.6e-32 142.1 192 38.5
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 2.0e-29 133.7 130 54.6
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-23 114.4 86 65.1
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.2e-23 114.4 178 35.4
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 6.8e-22 108.6 150 42.7
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 1.2e-18 97.8 66 71.2
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 3.9e-17 92.8 201 32.3
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.3e-12 77.8 157 36.3
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.1e-10 70.5 103 34.0
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 5.1e-09 65.9 52 57.7
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 7.3e-08 62.0 127 35.4
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 1.1e-06 58.2 60 51.7


User provided reference genes

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