Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.7e-40 169.1 96 100.0
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 3.6e-19 98.2 86 62.8
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 6.2e-19 97.4 93 58.1
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 8.1e-19 97.1 87 58.6
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 6.8e-18 94.0 90 57.8
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 1.5e-17 92.8 87 56.3
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.5e-17 92.8 93 51.6
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 7.6e-17 90.5 91 52.7
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 1.7e-16 89.4 92 53.3
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 2.9e-16 88.6 93 53.8
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 4.9e-16 87.8 95 51.6
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 4.9e-16 87.8 86 53.5
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 8.3e-16 87.0 93 51.6
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 8.3e-16 87.0 91 53.8
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.4e-15 86.3 87 55.2
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 1.4e-15 86.3 87 50.6
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 1.9e-15 85.9 88 56.8
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 3.2e-15 85.1 96 50.0
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 4.1e-15 84.7 93 53.8
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 7.1e-15 84.0 92 51.1
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 1.2e-14 83.2 92 51.1
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 1.6e-14 82.8 88 51.1
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.6e-14 82.8 97 50.5
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 2.1e-14 82.4 87 49.4
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 2.1e-14 82.4 79 53.2
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 3.0e-13 78.6 56 69.6
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 3.0e-13 78.6 98 46.9
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.1e-13 77.8 98 42.9
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 6.6e-13 77.4 91 45.1
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 1.5e-12 76.3 98 43.9
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.9e-12 75.9 83 49.4
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.3e-12 75.1 98 42.9
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.3e-12 75.1 89 42.7
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 4.3e-12 74.7 86 48.8
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 7.3e-12 73.9 97 48.5
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 7.3e-12 73.9 98 40.8
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 9.6e-12 73.6 83 45.8
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 9.6e-12 73.6 87 48.3
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 1.6e-11 72.8 93 48.4
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.7e-11 71.2 92 45.7
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 6.2e-11 70.9 96 44.8
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.1e-10 70.1 91 42.9
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 1.4e-10 69.7 95 43.2
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 3.1e-10 68.6 54 55.6
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 5.2e-10 67.8 38 73.7
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 5.2e-10 67.8 40 70.0
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 6.8e-10 67.4 92 42.4
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 6.8e-10 67.4 87 46.0
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 8.9e-10 67.0 92 42.4
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 1.2e-09 66.6 50 60.0
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 1.2e-09 66.6 101 44.6
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 7.6e-09 63.9 39 71.8
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 2.2e-08 62.4 33 72.7
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 4.9e-08 61.2 37 67.6
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 1.1e-07 60.1 33 69.7
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.4e-07 59.7 96 37.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 1.4e-07 59.7 36 66.7
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 1.2e-06 56.6 82 40.2
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 2.1e-06 55.8 39 56.4
Zm00001eb182560 Zea mays HOM05D008314 ORTHO05D010369 4.6e-06 54.7 45 55.6


User provided reference genes

Program Settings