Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 9.6e-52 206.5 98 100.0
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 4.6e-46 187.6 98 87.8
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 4.6e-46 187.6 98 85.7
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 5.1e-45 184.1 98 84.7
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 4.8e-43 177.6 98 85.7
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 8.2e-43 176.8 98 79.6
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 1.8e-42 175.6 98 81.6
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 5.3e-42 174.1 98 81.6
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 6.9e-42 173.7 95 86.3
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 1.2e-41 172.9 98 81.6
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 1.5e-41 172.6 98 80.6
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.6e-41 171.8 98 81.6
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 7.7e-41 170.2 98 78.6
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 7.7e-41 170.2 98 79.6
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 7.7e-41 170.2 98 79.6
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.0e-40 169.9 98 79.6
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 1.3e-40 169.5 98 80.6
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.7e-40 169.1 98 79.6
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 2.2e-40 168.7 96 79.2
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 1.1e-39 166.4 98 74.5
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 2.5e-39 165.2 98 78.6
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 2.5e-39 165.2 98 77.6
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 4.2e-39 164.5 99 77.8
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 1.2e-38 162.9 95 76.8
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 2.1e-38 162.2 95 75.8
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 6.1e-38 160.6 97 73.2
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 7.9e-38 160.2 98 76.5
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 1.0e-37 159.8 97 73.2
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 1.0e-37 159.8 98 74.5
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 1.4e-37 159.5 86 83.7
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 1.4e-37 159.5 98 72.4
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 1.5e-36 156.0 86 80.2
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 3.3e-36 154.8 98 75.5
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 1.7e-35 152.5 98 72.4
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 4.8e-35 151.0 98 72.4
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 8.2e-35 150.2 86 76.7
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 1.4e-34 149.4 100 73.0
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 1.8e-34 149.1 98 71.4
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.4e-34 148.7 99 71.7
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 3.1e-34 148.3 98 70.4
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 4.1e-34 147.9 98 69.4
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 6.9e-34 147.1 98 68.4
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 9.1e-34 146.7 98 71.4
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 9.1e-34 146.7 98 69.4
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.5e-33 146.0 98 71.4
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 1.5e-33 146.0 86 77.9
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 2.6e-33 145.2 86 79.1
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.6e-33 145.2 99 69.7
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 1.0e-32 143.3 107 64.5
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.2e-32 142.1 98 66.3
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 2.2e-32 142.1 98 66.3
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 3.8e-32 141.4 88 81.8
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 3.8e-32 141.4 98 64.3
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 5.0e-32 141.0 98 65.3
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 6.5e-32 140.6 98 64.3
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 8.5e-32 140.2 98 68.4
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 1.1e-31 139.8 100 67.0
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.9e-31 139.0 98 63.3
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 4.2e-31 137.9 107 61.7
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 4.2e-31 137.9 100 66.0
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 7.2e-31 137.1 86 72.1
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 7.2e-31 137.1 98 64.3
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 7.2e-31 137.1 98 69.4
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 1.6e-30 136.0 98 65.3
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 2.7e-30 135.2 98 68.4
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 2.7e-30 135.2 98 64.3
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 4.7e-30 134.4 98 62.2
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 6.1e-30 134.0 86 70.9
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 7.9e-30 133.7 98 66.3
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 7.9e-30 133.7 97 67.0
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 1.4e-29 132.9 99 64.6
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 1.4e-29 132.9 98 69.4
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 1.8e-29 132.5 99 67.7
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 2.3e-29 132.1 97 59.8
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 2.3e-29 132.1 87 73.6
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 3.0e-29 131.7 97 59.8
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 3.9e-29 131.3 136 53.7
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 8.8e-29 130.2 100 62.0
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 1.1e-28 129.8 86 72.1
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 2.6e-28 128.6 98 60.2
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 5.7e-28 127.5 98 59.2
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 7.4e-28 127.1 99 66.7
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 9.7e-28 126.7 102 63.7
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.3e-27 126.3 86 67.4
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.7e-27 125.9 94 61.7
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 2.8e-27 125.2 99 59.6
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 2.8e-27 125.2 99 64.6
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 3.7e-27 124.8 86 66.3
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 4.8e-27 124.4 101 61.4
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 6.3e-27 124.0 99 64.6
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 6.3e-27 124.0 98 62.2
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 8.2e-27 123.6 86 68.6
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 1.1e-26 123.2 86 66.3
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 1.8e-26 122.5 105 58.1
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 1.8e-26 122.5 75 74.7
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 5.3e-26 120.9 88 63.6
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 7.0e-26 120.6 88 65.9
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 9.1e-26 120.2 105 58.1
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.0e-25 119.0 89 61.8
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 2.6e-25 118.6 100 56.0
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 2.6e-25 118.6 104 57.7
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 3.5e-25 118.2 86 65.1
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 4.5e-25 117.9 102 57.8
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 5.9e-25 117.5 102 58.8
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 7.7e-25 117.1 103 57.3
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 1.0e-24 116.7 105 60.0
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.0e-24 116.7 86 62.8
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 6.5e-24 114.0 104 55.8
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 8.5e-24 113.6 107 54.2
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 1.5e-23 112.8 109 53.2
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 3.2e-23 111.7 86 59.3
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 3.2e-23 111.7 87 62.1
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 4.2e-23 111.3 82 63.4
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 4.2e-23 111.3 68 66.2
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 7.2e-23 110.5 88 62.5
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 8.0e-22 107.1 85 61.2
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 9.7e-20 100.1 75 66.7
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 1.8e-18 95.9 58 77.6
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 4.1e-18 94.7 61 73.8
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 7.0e-18 94.0 91 52.7
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 7.0e-18 94.0 91 52.7
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 1.2e-17 93.2 83 54.2
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 3.5e-17 91.7 75 58.7
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 1.7e-16 89.4 82 53.7
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 1.2e-14 83.2 73 56.2
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 3.0e-13 78.6 57 59.6
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 2.0e-12 75.9 57 57.9
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 2.6e-12 75.5 77 46.8
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 2.6e-12 75.5 77 46.8
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 4.8e-11 71.2 49 61.2
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 2.4e-10 68.9 41 70.7
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 3.5e-09 65.1 53 52.8
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 1.3e-08 63.2 62 46.8
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 6.5e-08 60.8 51 56.9
Zm00001eb318190 Zea mays HOM05D000360 ORTHO05D006835 1.1e-07 60.1 43 58.1
Carub.0003s3142 Capsella rubella HOM05D005781 ORTHO05D006835 7.2e-07 57.4 76 36.8
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 7.2e-07 57.4 70 41.4


User provided reference genes

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