Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3740 Acer truncatum HOM05D000140 ORTHO05D008077 4.3e-197 691.0 329 100.0
Atru.chr1.3737 Acer truncatum HOM05D000140 ORTHO05D008077 3.0e-129 465.7 405 64.2
Ciclev10024990m.g Citrus clementina HOM05D000140 ORTHO05D008077 1.7e-124 449.9 439 55.6
Duzib192G0008 Durio zibethinus HOM05D000140 ORTHO05D008077 5.4e-115 418.3 439 52.2
Thecc.06G112300 Theobroma cacao HOM05D000140 ORTHO05D008077 1.9e-112 409.8 445 51.5
Dinv30373 Davidia involucrata HOM05D000140 ORTHO05D008077 5.6e-112 408.3 437 51.7
Gohir.A05G135000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 8.1e-111 404.4 436 50.7
Gohir.D05G137000 Gossypium hirsutum HOM05D000140 ORTHO05D008077 5.2e-110 401.7 436 50.5
RcHm_v2.0_Chr2g0143451 Rosa chinensis HOM05D000140 ORTHO05D008077 5.2e-110 401.7 438 50.2
Gorai.009G141300 Gossypium raimondii HOM05D000140 ORTHO05D008077 2.0e-109 399.8 436 50.0
Cfa003578 Carpinus fangiana HOM05D000140 ORTHO05D008077 2.9e-108 396.0 437 50.6
Potri.003G037000 Populus trichocarpa HOM05D000140 ORTHO05D008077 2.9e-108 396.0 437 50.1
FAN02G0242 Fragaria x ananassa HOM05D000140 ORTHO05D008077 4.9e-108 395.2 438 49.1
FAN14G2243 Fragaria x ananassa HOM05D000140 ORTHO05D008077 4.9e-108 395.2 438 49.5
FAN05G3919 Fragaria x ananassa HOM05D000140 ORTHO05D008077 1.1e-107 394.0 438 49.3
Haze_15961 Corylus avellana HOM05D000140 ORTHO05D008077 1.9e-107 393.3 437 49.9
MD09G1192500 Malus domestica HOM05D000140 ORTHO05D008077 4.2e-107 392.1 436 50.0
COL.COLO4_30668 Corchorus olitorius HOM05D000140 ORTHO05D008077 5.4e-107 391.7 472 47.0
FAN09G3885 Fragaria x ananassa HOM05D000140 ORTHO05D008077 7.1e-107 391.3 438 49.3
CiPaw.01G224300 Carya illinoinensis HOM05D000140 ORTHO05D008077 2.7e-106 389.4 434 48.8
Hma1.2p1_0496F.1_g165850 Hydrangea macrophylla HOM05D000140 ORTHO05D008077 1.0e-105 387.5 439 48.7
QL05p012092 Quercus lobata HOM05D000140 ORTHO05D008077 3.0e-105 386.0 435 49.7
Rhsim12G0206500 Rhododendron simsii HOM05D001215 ORTHO05D008077 4.3e-104 382.1 439 48.3
GSVIVG01016865001 Vitis vinifera HOM05D000140 ORTHO05D008077 4.3e-104 382.1 429 49.7
vmacro17024 Vaccinium macrocarpon HOM05D000140 ORTHO05D008077 9.6e-104 380.9 439 47.2
Prupe.3G048800 Prunus persica HOM05D000140 ORTHO05D008077 2.1e-103 379.8 438 48.9
Duzib235G0366 Durio zibethinus HOM05D000140 ORTHO05D008077 1.8e-102 376.7 439 48.7
Manes.11G025700 Manihot esculenta HOM05D000140 ORTHO05D008077 1.8e-102 376.7 440 49.5
VMungo1080G0937 Vigna mungo HOM05D000140 ORTHO05D008077 3.1e-102 375.9 439 47.4
Lalb_Chr24g0396441 Lupinus albus HOM05D000140 ORTHO05D008077 4.0e-102 375.6 440 47.0
QL05p012111 Quercus lobata HOM05D000140 ORTHO05D008077 4.0e-102 375.6 433 48.0
TAR624G1234 Trochodendron aralioides HOM05D000140 ORTHO05D008077 6.9e-102 374.8 439 48.1
Actinidia09033 Actinidia chinensis HOM05D000140 ORTHO05D008077 9.0e-102 374.4 439 48.7
Medtr2g100000 Medicago truncatula HOM05D000140 ORTHO05D008077 9.0e-102 374.4 439 47.4
A07p30010 Brassica napus HOM05D000140 ORTHO05D008077 2.0e-101 373.2 439 47.4
BraA07t30639Z Brassica rapa HOM05D000140 ORTHO05D008077 2.0e-101 373.2 439 47.4
Phvul.005G158700 Phaseolus vulgaris HOM05D000140 ORTHO05D008077 2.6e-101 372.9 437 46.0
Nitab4.5_0008454g0020 Nicotiana tabacum HOM05D000140 ORTHO05D008077 4.5e-101 372.1 434 46.8
AT1G72990 Arabidopsis thaliana HOM05D000140 ORTHO05D008077 5.8e-101 371.7 432 47.2
Psat5g292840 Pisum sativum HOM05D000140 ORTHO05D008077 5.8e-101 371.7 441 46.3
Cpa.g.sc25.44 Carica papaya HOM05D000140 ORTHO05D008077 9.9e-101 370.9 437 49.0
TWI31G0962 Tripterygium wilfordii HOM05D000140 ORTHO05D008077 9.9e-101 370.9 444 48.0
AL2G32740 Arabidopsis lyrata HOM05D000140 ORTHO05D008077 1.3e-100 370.5 422 48.8
THA.LOC104812215 Tarenaya hassleriana HOM05D000140 ORTHO05D008077 1.3e-100 370.5 447 47.9
BcaC08g45680 Brassica carinata HOM05D000140 ORTHO05D008077 1.7e-100 370.2 432 47.9
C06p34430 Brassica napus HOM05D000140 ORTHO05D008077 1.7e-100 370.2 432 47.9
Glyma.13G349600 Glycine max HOM05D000140 ORTHO05D008077 2.2e-100 369.8 439 46.7
CAN.G825.37 Capsicum annuum HOM05D000140 ORTHO05D008077 3.8e-100 369.0 433 47.8
PGR102G2012 Punica granatum HOM05D000140 ORTHO05D008077 3.8e-100 369.0 437 46.5
Nitab4.5_0000255g0220 Nicotiana tabacum HOM05D000140 ORTHO05D008077 6.4e-100 368.2 434 46.1
BolC6t38553H Brassica oleracea HOM05D000140 ORTHO05D008077 1.4e-99 367.1 439 46.7
Sabra03G0023800 Salix brachista HOM05D000140 ORTHO05D008077 3.2e-99 365.9 438 46.3
Sed0001524 Sechium edule HOM05D000140 ORTHO05D008077 3.2e-99 365.9 438 47.5
BcaB03g15696 Brassica carinata HOM05D000140 ORTHO05D008077 5.4e-99 365.2 432 47.5
CANSAT56G4101 Cannabis sativa HOM05D000140 ORTHO05D008077 7.1e-99 364.8 437 47.8
Ca_01204_v3 Cicer arietinum L. HOM05D000140 ORTHO05D008077 1.6e-98 363.6 442 46.4
Oeu011886.1 Olea europaea HOM05D000140 ORTHO05D008077 2.1e-98 363.2 435 46.9
DCAR_016153 Daucus carota HOM05D000140 ORTHO05D008077 1.0e-97 360.9 434 46.3
Sopen06g022120 Solanum pennellii HOM05D000140 ORTHO05D008077 1.0e-97 360.9 436 46.6
TPR.G6582 Trifolium pratense HOM05D000140 ORTHO05D008077 1.0e-97 360.9 439 45.6
ECA232G0751 Erigeron canadensis HOM05D000140 ORTHO05D008077 1.3e-97 360.5 435 46.2
FvH4_6g33540 Fragaria vesca HOM05D000140 ORTHO05D008077 6.7e-97 358.2 438 46.3
CsaV3_3G043840 Cucumis sativus L. HOM05D000140 ORTHO05D008077 8.7e-97 357.8 437 46.7
ClCG07G013770 Citrullus lanatus HOM05D000140 ORTHO05D008077 1.1e-96 357.5 440 47.5
Carub.0002s1975 Capsella rubella HOM05D000140 ORTHO05D008077 7.4e-96 354.8 431 46.6
CSS0012901 Camellia sinensis var. sinensis HOM05D000140 ORTHO05D008077 9.6e-96 354.4 504 42.3
Eucgr.J02852 Eucalyptus grandis HOM05D000140 ORTHO05D008077 1.6e-95 353.6 436 45.4
Thhalv10018211m.g Eutrema salsugineum HOM05D000140 ORTHO05D008077 2.1e-95 353.2 428 46.3
Lj3g0010439 Lotus japonicus HOM05D000140 ORTHO05D008077 2.1e-95 353.2 439 45.1
Nn8g38831 Nelumbo nucifera HOM05D000140 ORTHO05D008077 6.9e-94 348.2 423 45.2
Hund18711 Selenicereus undatus HOM05D000140 ORTHO05D008077 6.9e-94 348.2 446 43.7
Aqoxy7G04010 Aquilegia oxysepala HOM05D000140 ORTHO05D008077 9.0e-94 347.8 438 45.9
arahy.Tifrunner.gnm1.ann1.3G454N Arachis hypogaea HOM05D000140 ORTHO05D008077 9.0e-94 347.8 457 43.3
arahy.Tifrunner.gnm1.ann1.GQ1CY0 Arachis hypogaea HOM05D000140 ORTHO05D008077 9.0e-94 347.8 458 43.2
Atru.chr1.3755 Acer truncatum HOM05D000140 ORTHO05D008077 9.9e-93 344.4 267 68.5
EL10Ac7g16346 Beta vulgaris HOM05D000140 ORTHO05D008077 9.9e-93 344.4 438 44.3
Migut.I01031 Erythranthe guttata HOM05D000140 ORTHO05D008077 2.2e-92 343.2 425 46.1
Lj5A44G111 Lonicera japonica HOM05D000140 ORTHO05D008077 2.2e-92 343.2 331 54.4
Cc04_g01880 Coffea canephora HOM05D000140 ORTHO05D008077 8.4e-92 341.3 425 46.1
HanXRQChr16g0514871 Helianthus annuus HOM05D000140 ORTHO05D008077 1.4e-91 340.5 422 46.2
Lsat_1_v5_gn_0_11160 Lactuca sativa HOM05D000140 ORTHO05D008077 9.3e-91 337.8 425 45.9
SalBow6G5199 Salvia bowleyana HOM05D000140 ORTHO05D008077 2.7e-90 336.3 448 44.9
SalBow6G5580 Salvia bowleyana HOM05D000140 ORTHO05D008077 6.0e-90 335.1 448 44.2
Aa31LG4G3250 Aethionema arabicum HOM05D000140 ORTHO05D008077 1.3e-89 334.0 413 44.8
MBI01_g01259_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D008077 1.8e-89 333.6 424 45.0
HanXRQChr05g0140791 Helianthus annuus HOM05D000140 ORTHO05D008077 1.9e-88 330.1 426 46.0
Zm00001eb294210 Zea mays HOM05D000140 ORTHO05D008077 5.3e-86 322.0 436 43.8
PSO210G3869 Papaver somniferum HOM05D000140 ORTHO05D008077 4.5e-85 318.9 435 42.1
PSO210G7565 Papaver somniferum HOM05D000140 ORTHO05D008077 2.5e-83 313.2 430 42.3
Os05g0539400 Oryza sativa ssp. japonica HOM05D000140 ORTHO05D008077 5.5e-83 312.0 436 42.4
Sc15g0000170 Simmondsia chinensis HOM05D000140 ORTHO05D008077 4.6e-82 308.9 334 48.8
Solyc06g062660.4 Solanum lycopersicum HOM05D000140 ORTHO05D008077 2.3e-81 306.6 406 43.8
Actinidia26056 Actinidia chinensis HOM05D000140 ORTHO05D008077 3.1e-78 296.2 403 45.4
MELO3C025840.2 Cucumis melo HOM05D000140 ORTHO05D008077 9.4e-75 284.6 454 40.5
ATR0716G096 Amborella trichopoda HOM05D000140 ORTHO05D008077 7.7e-69 265.0 406 39.4
AUR62009830 Chenopodium quinoa HOM05D000140 ORTHO05D008077 1.7e-68 263.8 380 40.0
AUR62038142 Chenopodium quinoa HOM05D000140 ORTHO05D008077 1.1e-67 261.2 360 41.7
unitig_0.g871 Utricularia gibba HOM05D000140 ORTHO05D008077 1.6e-66 257.3 391 41.2
Peaxi162Scf00207g01364 Petunia axillaris HOM05D000140 ORTHO05D008077 1.3e-63 247.7 401 38.9
SEGI_34008 Sequoiadendron giganteum HOM05D000140 ORTHO05D008077 5.3e-62 242.3 316 43.0
Atru.chr1.3754 Acer truncatum HOM05D000140 ORTHO05D008077 5.7e-56 222.2 102 99.0
SMO351G0560 Selaginella moellendorffii HOM05D000140 ORTHO05D008077 6.3e-55 218.8 420 35.7
PGSC0003DMG400004881 Solanum tuberosum HOM05D000140 ORTHO05D008077 9.1e-54 214.9 259 47.1
Pp3c13_7050 Physcomitrium patens HOM05D000140 ORTHO05D008077 1.3e-52 211.1 429 33.6
Pp3c26_2000 Physcomitrium patens HOM05D000140 ORTHO05D008077 2.0e-48 197.2 430 32.3
CARHR065960 Cardamine hirsuta HOM05D000140 ORTHO05D008077 4.1e-46 189.5 104 79.8
Ca_20488_v3 Cicer arietinum L. HOM05D000140 ORTHO05D008077 4.5e-45 186.0 105 79.0
Ca_20489_v3 Cicer arietinum L. HOM05D000057 ORTHO05D008077 4.5e-45 186.0 105 79.0
Ca_28283_v3 Cicer arietinum L. HOM05D000140 ORTHO05D008077 4.5e-45 186.0 105 79.0
HPP92_005527 Vanilla planifolia HOM05D000140 ORTHO05D008077 1.7e-44 184.1 246 43.5
CDE06G1291 Ceratophyllum demersum HOM05D000140 ORTHO05D008077 2.5e-43 180.3 104 76.9
GSVIVG01033176001 Vitis vinifera HOM05D001036 ORTHO05D003968 2.1e-42 177.2 149 58.4
Mapoly0113s0014 Marchantia polymorpha HOM05D000140 ORTHO05D008077 8.0e-42 175.3 281 38.4
DCAR_000353 Daucus carota HOM05D000140 ORTHO05D008077 5.4e-30 136.0 176 42.0
CDE11G0798 Ceratophyllum demersum HOM05D000140 ORTHO05D008077 4.1e-22 109.8 98 57.1
CBR_g21802 Chara braunii HOM05D000140 ORTHO05D008077 1.0e-20 105.1 106 47.2
Peaxi162Scf00177g00216 Petunia axillaris HOM05D000140 ORTHO05D000087 8.3e-07 58.9 316 24.1
Oeu026746.1 Olea europaea HOM05D000140 ORTHO05D000087 5.4e-06 56.2 125 32.0


User provided reference genes

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