Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 0.0e+00 2053.1 1241 100.0
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 0.0e+00 1240.7 1206 66.7
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 0.0e+00 1119.8 1235 59.6
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 0.0e+00 1107.0 1210 60.8
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 0.0e+00 1099.3 1206 59.2
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 8.5e-312 1074.7 1207 58.7
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 4.6e-308 1061.6 1215 57.9
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.1e-306 1057.0 1207 59.5
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 5.6e-306 1054.7 1205 60.2
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 2.2e-302 1042.7 1207 57.8
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 3.7e-297 1025.4 1216 56.8
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 2.6e-287 992.6 1206 56.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 4.2e-285 985.3 1220 54.7
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 6.1e-284 981.5 1210 55.2
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 1.0e-283 980.7 1206 56.2
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.3e-283 980.3 1208 55.5
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 2.3e-283 979.5 1208 55.3
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 6.7e-283 978.0 1205 56.3
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 9.4e-277 957.6 1199 56.8
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.7e-276 956.1 1212 54.2
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 8.8e-275 951.0 1213 53.8
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 1.1e-274 950.7 1213 53.8
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.8e-273 945.3 1212 53.7
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 1.4e-269 933.7 1154 58.3
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 2.5e-269 932.9 1244 52.9
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 5.5e-269 931.8 1214 53.3
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 2.3e-267 926.4 1213 53.1
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 3.3e-266 922.5 1208 52.8
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 2.8e-265 919.5 1212 52.6
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 9.1e-264 914.4 1213 52.3
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 5.9e-263 911.8 1218 53.8
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 6.1e-260 901.7 1251 52.8
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 3.0e-259 899.4 1217 54.1
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 4.4e-258 895.6 1212 51.1
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.4e-256 890.6 1211 51.3
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 1.7e-254 883.6 1212 51.9
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.9e-253 880.2 1211 51.4
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 1.8e-251 873.6 1210 51.2
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 3.0e-251 872.8 1216 51.2
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 4.0e-251 872.5 1213 50.9
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 5.9e-247 858.6 1208 50.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 7.7e-247 858.2 1360 46.9
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 2.2e-246 856.7 1211 51.0
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.0e-243 847.8 1208 48.2
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 1.8e-243 847.0 1209 50.2
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 2.6e-242 843.2 1245 50.3
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 2.3e-235 820.1 1195 47.2
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 9.8e-234 814.7 1217 50.1
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 3.7e-233 812.8 1218 49.3
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 7.3e-229 798.5 1193 48.8
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 1.7e-225 787.3 1203 48.2
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 1.7e-222 777.3 1216 48.7
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 4.7e-220 769.2 1228 46.4
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.6e-218 763.5 1097 51.1
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.3e-217 761.1 1216 47.5
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 4.3e-213 746.1 1215 47.2
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.4e-208 731.1 1207 47.8
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 3.2e-208 729.9 1221 46.6
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 6.8e-203 712.2 1217 46.0
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.7e-201 707.6 1213 46.8
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 9.3e-200 701.8 1214 46.7
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 6.9e-195 685.6 1198 46.2
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 3.0e-190 670.2 1210 45.9
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 8.7e-190 668.7 1137 47.1
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 1.3e-185 654.8 1209 45.1
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 8.4e-185 652.1 1242 44.4
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 4.2e-184 649.8 1212 45.9
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.2e-183 648.3 1076 45.9
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 1.1e-181 641.7 1207 45.7
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 1.0e-174 618.6 874 54.7
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 3.0e-174 617.1 1189 42.9
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 5.1e-174 616.3 1203 43.9
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 7.4e-173 612.5 1227 43.6
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.8e-171 607.8 1194 44.3
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 4.2e-168 596.7 1052 45.8
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 6.7e-166 589.3 1221 42.8
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 2.0e-162 577.8 321 96.6
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 7.7e-162 575.9 1202 40.3
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 1.1e-160 572.0 1210 40.8
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 9.4e-160 568.9 1045 42.2
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 2.3e-158 564.3 1227 41.6
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 6.7e-158 562.8 1197 42.6
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.8e-156 557.4 1236 38.6
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 2.0e-154 551.2 1203 41.9
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 3.8e-153 547.0 1182 41.9
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 5.0e-153 546.6 1254 38.0
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 1.6e-151 541.6 1191 39.1
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 1.1e-147 528.9 1177 42.3
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 9.1e-147 525.8 1204 40.7
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 2.0e-146 524.6 1225 39.3
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 2.5e-144 517.7 1201 39.9
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 3.6e-143 513.8 1199 39.8
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 7.5e-141 506.1 1202 38.3
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 7.5e-141 506.1 1202 38.3
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 7.5e-141 506.1 1202 38.3
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.9e-136 491.5 929 40.6
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 5.2e-134 483.4 585 51.5
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 8.5e-129 466.1 1172 40.4
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 1.2e-125 455.7 1200 37.3
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 9.8e-125 452.6 1212 38.5
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 1.8e-123 448.4 1179 38.0
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 7.0e-123 446.4 1178 37.5
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 2.8e-111 407.9 1090 33.0
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 1.1e-104 386.0 1060 37.4
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 4.3e-104 384.0 1230 35.4
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 1.5e-101 375.6 1124 32.7
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 4.6e-98 364.0 1239 35.2
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.7e-97 362.1 1291 32.6
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 6.6e-97 360.1 1182 34.5
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.9e-91 342.0 367 57.5
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 2.4e-91 341.7 726 38.2
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 5.6e-88 330.5 1076 34.9
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.0e-85 322.0 1261 32.0
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 1.3e-84 319.3 1196 31.0
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 1.9e-83 315.5 1052 34.9
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.9e-72 278.9 256 60.9
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 6.9e-70 270.4 275 57.8
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 3.0e-49 201.8 149 69.1
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.8e-47 195.3 646 30.3
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 4.1e-46 191.4 129 70.5
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 7.9e-42 177.2 297 45.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 8.8e-41 173.7 362 37.0
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 1.5e-40 172.9 372 35.8
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 1.7e-36 159.5 130 65.4
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 1.7e-36 159.5 422 31.8
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 3.2e-35 155.2 747 28.1
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 5.5e-35 154.5 1290 26.8
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.6e-34 151.8 891 30.6
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 8.2e-31 140.6 251 39.8
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.7e-28 132.9 194 42.3
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 1.5e-27 129.8 105 58.1
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 7.5e-24 117.5 163 43.6
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 1.3e-23 116.7 147 44.9
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 4.8e-23 114.8 61 80.3
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 1.2e-18 100.1 152 42.1
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 8.3e-15 87.4 218 34.4
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 1.8e-14 86.3 702 32.1
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 1.8e-14 86.3 72 56.9
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 9.1e-14 84.0 110 45.5
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 2.7e-13 82.4 60 71.7
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 4.5e-13 81.6 58 70.7
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 7.2e-11 74.3 55 69.1
SHI11172 Sapria himalayana HOM05D004845 ORTHO05D005957 2.1e-10 72.8 751 30.0
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 4.7e-10 71.6 192 33.9
SHI11166 Sapria himalayana HOM05D004845 ORTHO05D005957 4.0e-09 68.6 48 75.0
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 3.7e-07 62.0 54 64.8


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