Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3299 Acer truncatum HOM05D006851 ORTHO05D008844 1.8e-63 245.7 126 100.0
Atru.chr6.2752 Acer truncatum HOM05D006851 ORTHO05D008844 3.9e-37 158.3 91 89.0
Ciclev10016542m.g Citrus clementina HOM05D006851 ORTHO05D008844 3.4e-25 118.6 92 69.6
CiPaw.04G128500 Carya illinoinensis HOM05D006851 ORTHO05D008844 9.0e-18 94.0 86 61.6
ClCG09G020820 Citrullus lanatus HOM05D006851 ORTHO05D008844 9.0e-18 94.0 106 50.9
MELO3C014448.2 Cucumis melo HOM05D006851 ORTHO05D008844 2.0e-17 92.8 114 47.4
ClCG09G020830 Citrullus lanatus HOM05D006851 ORTHO05D008844 2.6e-17 92.4 96 52.1
CsaV3_6G037870 Cucumis sativus L. HOM05D006851 ORTHO05D008844 1.7e-16 89.7 97 50.5
Cpa.g.sc483.1 Carica papaya HOM05D006851 ORTHO05D008844 2.2e-16 89.4 83 57.8
Sed0012320 Sechium edule HOM05D006851 ORTHO05D008844 4.2e-15 85.1 96 50.0
Dinv06196 Davidia involucrata HOM05D006851 ORTHO05D008844 1.6e-14 83.2 78 59.0
Dinv00450 Davidia involucrata HOM05D006851 ORTHO05D008844 2.1e-14 82.8 78 59.0
FAN09G4077 Fragaria x ananassa HOM05D006851 ORTHO05D008844 2.1e-14 82.8 74 62.2
PGR142G1684 Punica granatum HOM05D006851 ORTHO05D008844 2.1e-14 82.8 93 49.5
RcHm_v2.0_Chr2g0131101 Rosa chinensis HOM05D006851 ORTHO05D008844 2.1e-14 82.8 88 55.7
FAN14G0067 Fragaria x ananassa HOM05D006851 ORTHO05D008844 3.5e-14 82.0 74 60.8
arahy.Tifrunner.gnm1.ann1.WV2S1U Arachis hypogaea HOM05D006851 ORTHO05D008844 4.6e-14 81.6 82 53.7
FvH4_6g27820 Fragaria vesca HOM05D006851 ORTHO05D008844 7.9e-14 80.9 74 60.8
Thhalv10017191m.g Eutrema salsugineum HOM05D006851 ORTHO05D008844 1.3e-13 80.1 96 52.1
Manes.02G088700 Manihot esculenta HOM05D006851 ORTHO05D008844 1.3e-13 80.1 88 53.4
Thecc.01G154800 Theobroma cacao HOM05D006851 ORTHO05D008844 1.3e-13 80.1 92 56.5
CANSAT64G1521 Cannabis sativa HOM05D006851 ORTHO05D008844 2.3e-13 79.3 92 55.4
Aa31LG1G24530 Aethionema arabicum HOM05D006851 ORTHO05D008844 3.0e-13 79.0 95 48.4
Cfa014654 Carpinus fangiana HOM05D006851 ORTHO05D008844 3.0e-13 79.0 92 53.3
Lalb_Chr03g0029611 Lupinus albus HOM05D006851 ORTHO05D008844 3.0e-13 79.0 81 53.1
Prupe.3G112500 Prunus persica HOM05D006851 ORTHO05D008844 6.6e-13 77.8 78 56.4
Haze_13231 Corylus avellana HOM05D006851 ORTHO05D008844 8.7e-13 77.4 92 53.3
COL.COLO4_33621 Corchorus olitorius HOM05D006851 ORTHO05D008844 1.9e-12 76.3 93 51.6
Actinidia24403 Actinidia chinensis HOM05D006851 ORTHO05D008844 2.5e-12 75.9 94 50.0
Solyc07g055340.3 Solanum lycopersicum HOM05D006851 ORTHO05D008844 3.3e-12 75.5 81 53.1
PGSC0003DMG400017313 Solanum tuberosum HOM05D006851 ORTHO05D008844 3.3e-12 75.5 80 53.8
Gohir.A12G091300 Gossypium hirsutum HOM05D006851 ORTHO05D008844 5.6e-12 74.7 94 53.2
Gorai.008G099400 Gossypium raimondii HOM05D006851 ORTHO05D008844 5.6e-12 74.7 94 53.2
Hma1.2p1_0178F.1_g078440 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 1.3e-11 73.6 90 50.0
MD17G1263400 Malus domestica HOM05D006851 ORTHO05D008844 1.3e-11 73.6 85 49.4
Sopen07g026880 Solanum pennellii HOM05D006851 ORTHO05D008844 1.6e-11 73.2 81 53.1
CARHR137850 Cardamine hirsuta HOM05D006851 ORTHO05D008844 2.8e-11 72.4 89 51.7
Duzib187G0166 Durio zibethinus HOM05D006851 ORTHO05D008844 3.6e-11 72.0 92 55.4
Gohir.D12G091800 Gossypium hirsutum HOM05D006851 ORTHO05D008844 6.2e-11 71.2 94 52.1
AL4G41380 Arabidopsis lyrata HOM05D006851 ORTHO05D008844 8.1e-11 70.9 89 50.6
THA.LOC104803044 Tarenaya hassleriana HOM05D006851 ORTHO05D008844 1.1e-10 70.5 119 41.2
MD09G1234300 Malus domestica HOM05D006851 ORTHO05D008844 1.8e-10 69.7 110 40.9
TWI59G1351 Tripterygium wilfordii HOM05D006851 ORTHO05D008844 2.4e-10 69.3 93 44.1
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 3.1e-10 68.9 91 47.3
Eucgr.K01172 Eucalyptus grandis HOM05D006851 ORTHO05D008844 4.0e-10 68.6 114 45.6
Peaxi162Scf00469g00629 Petunia axillaris HOM05D006851 ORTHO05D008844 6.9e-10 67.8 122 42.6
QL08p039990 Quercus lobata HOM05D006851 ORTHO05D008844 6.9e-10 67.8 86 48.8
Sp4g24890 Schrenkiella parvula HOM05D006851 ORTHO05D008844 2.6e-09 65.9 71 49.3
Carub.0004s2521 Capsella rubella HOM05D006851 ORTHO05D008844 4.5e-09 65.1 89 50.6
Hma1.2p1_0178F.1_g078450 Hydrangea macrophylla HOM05D006851 ORTHO05D008844 4.5e-09 65.1 63 55.6
GSVIVG01020766001 Vitis vinifera HOM05D006851 ORTHO05D008844 9.9e-09 63.9 75 56.0
Phvul.011G124700 Phaseolus vulgaris HOM05D006851 ORTHO05D008844 1.3e-08 63.5 76 47.4
VMungo1127G1292 Vigna mungo HOM05D006851 ORTHO05D008844 1.3e-08 63.5 76 47.4
Aqoxy4G00244 Aquilegia oxysepala HOM05D006851 ORTHO05D008844 2.2e-08 62.8 69 59.4
CAN.G1360.8 Capsicum annuum HOM05D006851 ORTHO05D008844 2.2e-08 62.8 88 43.2
Nitab4.5_0000249g0050 Nicotiana tabacum HOM05D006851 ORTHO05D008844 3.8e-08 62.0 89 44.9
Oeu020925.1 Olea europaea HOM05D006851 ORTHO05D008844 3.8e-08 62.0 110 40.9
Sabra10G0010500 Salix brachista HOM05D006851 ORTHO05D008844 3.8e-08 62.0 96 39.6
Lsat_1_v5_gn_4_64780 Lactuca sativa HOM05D006851 ORTHO05D008844 4.9e-08 61.6 91 47.3
AT2G42770 Arabidopsis thaliana HOM05D006851 ORTHO05D008844 6.4e-08 61.2 89 44.9
SalBow7G2485 Salvia bowleyana HOM05D006851 ORTHO05D008844 1.4e-07 60.1 70 42.9
Nitab4.5_0005922g0060 Nicotiana tabacum HOM05D006851 ORTHO05D008844 2.4e-07 59.3 89 43.8
Cc05_g08670 Coffea canephora HOM05D006851 ORTHO05D008844 5.5e-07 58.2 96 43.8
Medtr4g078760 Medicago truncatula HOM05D006851 ORTHO05D008844 7.1e-07 57.8 111 37.8
TPR.G9347 Trifolium pratense HOM05D006851 ORTHO05D008844 1.2e-06 57.0 111 37.8
Psat7g167960 Pisum sativum HOM05D006851 ORTHO05D008844 1.6e-06 56.6 84 42.9
Ca_18924_v3 Cicer arietinum L. HOM05D006851 ORTHO05D008844 2.7e-06 55.8 76 46.1
Migut.M00236 Erythranthe guttata HOM05D006851 ORTHO05D008844 3.5e-06 55.5 83 41.0
Lj1A675G56 Lonicera japonica HOM05D006851 ORTHO05D008844 6.0e-06 54.7 90 43.3
BcaB06g29263 Brassica carinata HOM05D006851 ORTHO05D008844 7.9e-06 54.3 74 51.4
TAR627G1017 Trochodendron aralioides HOM05D006851 ORTHO05D008844 7.9e-06 54.3 77 53.2


User provided reference genes

Program Settings