Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.315 Acer truncatum HOM05D005766 ORTHO05D007002 3.7e-252 874.4 435 100.0
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 9.5e-176 620.5 431 73.3
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 6.8e-174 614.4 438 73.3
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 4.4e-173 611.7 445 73.0
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.2e-170 603.6 442 71.9
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 2.7e-170 602.4 424 72.6
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 1.1e-168 597.0 439 71.1
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 1.5e-168 596.7 435 70.3
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 5.6e-168 594.7 435 70.1
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 9.5e-168 594.0 435 70.1
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 1.8e-166 589.7 446 70.0
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 2.0e-165 586.3 439 69.5
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 2.9e-164 582.4 435 71.0
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 1.1e-163 580.5 453 67.8
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 7.1e-163 577.8 393 73.8
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 2.3e-161 572.8 461 66.6
RcHm_v2.0_Chr1g0379661 Rosa chinensis HOM05D005766 ORTHO05D007002 2.3e-161 572.8 443 70.0
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 3.1e-158 562.4 454 66.5
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 4.0e-158 562.0 429 68.8
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 3.4e-157 558.9 425 67.5
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 7.6e-157 557.8 449 65.9
HanXRQChr14g0440231 Helianthus annuus HOM05D005766 ORTHO05D007002 4.9e-156 555.1 335 80.6
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 4.9e-156 555.1 422 69.4
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 8.4e-156 554.3 424 68.9
Lalb_Chr06g0161411 Lupinus albus HOM05D005766 ORTHO05D007002 2.4e-155 552.7 419 68.7
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 9.2e-155 550.8 339 79.4
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 7.8e-154 547.7 420 68.6
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 7.8e-154 547.7 439 66.1
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 2.3e-153 546.2 428 67.3
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 5.1e-153 545.0 342 79.2
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 8.7e-153 544.3 437 67.0
QL11p056564 Quercus lobata HOM05D005766 ORTHO05D007002 1.1e-152 543.9 418 69.9
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 1.9e-152 543.1 423 68.1
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.9e-152 543.1 337 78.6
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 3.3e-152 542.3 419 68.3
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 5.6e-152 541.6 423 68.3
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 5.6e-152 541.6 441 64.2
Medtr1g099380 Medicago truncatula HOM05D005766 ORTHO05D007002 7.3e-152 541.2 415 69.4
Psat6g194920 Pisum sativum HOM05D005766 ORTHO05D007002 2.1e-151 539.7 424 68.2
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 1.8e-150 536.6 431 64.5
Oeu003335.2 Olea europaea HOM05D005766 ORTHO05D007002 9.0e-150 534.3 350 74.6
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 3.8e-148 528.9 428 66.6
Sc13g0009380 Simmondsia chinensis HOM05D005766 ORTHO05D007002 1.1e-147 527.3 427 67.2
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 3.2e-147 525.8 459 62.3
Sopen12g011340 Solanum pennellii HOM05D005766 ORTHO05D007002 5.4e-147 525.0 433 63.3
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 9.6e-144 514.2 355 71.3
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 8.1e-143 511.1 499 58.3
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 1.4e-142 510.4 393 70.7
HPP92_022503 Vanilla planifolia HOM05D005766 ORTHO05D007002 6.9e-142 508.1 335 73.7
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 9.0e-142 507.7 428 61.2
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.6e-141 506.1 444 64.0
EL10Ac3g05375 Beta vulgaris HOM05D005766 ORTHO05D007002 3.4e-141 505.8 396 66.4
Peaxi162Scf00023g00720 Petunia axillaris HOM05D005766 ORTHO05D007002 7.6e-141 504.6 506 57.5
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 8.4e-140 501.1 423 63.1
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 8.4e-140 501.1 527 56.0
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 6.0e-138 495.0 378 67.7
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 1.5e-136 490.3 426 62.7
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 7.6e-133 478.0 384 66.1
CDE02G1402 Ceratophyllum demersum HOM05D001977 ORTHO05D002246 4.8e-127 458.8 368 64.4
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 2.6e-125 453.0 434 57.8
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 4.5e-117 425.6 381 60.4
Glyma.09G181880 Glycine max HOM05D005766 ORTHO05D007002 1.0e-116 424.5 236 86.4
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 1.1e-115 421.0 426 56.8
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.4e-110 404.1 450 55.8
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 5.0e-108 395.6 434 50.2
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 7.2e-107 391.7 474 52.7
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 9.4e-107 391.3 474 52.5
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 1.2e-106 391.0 434 52.5
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 2.7e-106 389.8 242 79.3
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.4e-105 387.5 307 67.1
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 3.0e-105 386.3 307 66.8
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 1.4e-102 377.5 392 52.8
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 2.0e-101 373.6 456 50.7
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 2.0e-93 347.1 268 69.0
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.5e-93 345.9 500 47.0
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 1.5e-91 340.9 444 50.0
Nitab4.5_0014657g0010 Nicotiana tabacum HOM05D005766 ORTHO05D007002 1.8e-89 334.0 258 67.4
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 9.4e-83 311.6 265 58.1
QL09p011984 Quercus lobata HOM05D005766 ORTHO05D007002 6.3e-79 298.9 285 60.0
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 3.8e-76 289.7 303 56.4
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.7e-71 274.2 326 46.6
TWI39G0059 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 2.4e-70 270.4 168 77.4
Actinidia08607 Actinidia chinensis HOM05D005766 ORTHO05D007002 9.5e-67 258.5 152 82.2
CBR_g23333 Chara braunii HOM05D005766 ORTHO05D007002 1.2e-66 258.1 252 51.2
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.3e-65 253.8 250 61.2
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 4.4e-64 249.6 250 61.2
Nitab4.5_0000157g0190 Nicotiana tabacum HOM05D005766 ORTHO05D007002 4.3e-59 233.0 239 55.6
Glyma.12G172150 Glycine max HOM05D005766 ORTHO05D007002 8.3e-55 218.8 123 87.0
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 8.3e-55 218.8 158 70.9
Glyma.03G072901 Glycine max HOM05D005766 ORTHO05D007002 1.5e-51 208.0 115 84.3
Glyma.16G148650 Glycine max HOM05D005766 ORTHO05D007002 1.9e-51 207.6 102 95.1
Glyma.10G228301 Glycine max HOM05D005766 ORTHO05D007002 1.6e-50 204.5 100 96.0
Nitab4.5_0000327g0060 Nicotiana tabacum HOM05D005766 ORTHO05D007002 7.1e-38 162.5 90 84.4
QL09p011981 Quercus lobata HOM05D005766 ORTHO05D007002 6.6e-36 156.0 101 75.2
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.5e-32 144.8 220 38.2
COL.COLO4_30253 Corchorus olitorius HOM05D005766 ORTHO05D007002 1.3e-23 115.2 147 48.3
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 5.1e-20 103.2 301 28.9
Cfa000854 Carpinus fangiana HOM05D005766 ORTHO05D007002 8.7e-20 102.4 77 66.2
CSS0010184 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 6.2e-18 96.3 78 64.1
CSS0002634 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.4e-17 94.4 68 70.6
Actinidia08608 Actinidia chinensis HOM05D005766 ORTHO05D007002 3.1e-17 94.0 68 67.6
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 9.3e-14 82.4 249 25.7
Peaxi162Scf00603g00414 Petunia axillaris HOM05D007579 ORTHO05D000285 7.9e-13 79.3 60 65.0
GSVIVG01035793001 Vitis vinifera HOM05D000836 ORTHO05D000709 2.2e-07 61.2 219 24.7
Solyc12g009030.2 Solanum lycopersicum HOM05D005151 ORTHO05D006322 3.8e-07 60.5 296 23.6
Glyma.08G354500 Glycine max HOM05D000836 ORTHO05D000709 1.9e-06 58.2 221 23.1
Cfa018082 Carpinus fangiana HOM05D002332 ORTHO05D002509 2.5e-06 57.8 189 24.3
CiPaw.05G179300 Carya illinoinensis HOM05D002332 ORTHO05D002509 3.2e-06 57.4 165 25.5
Glyma.05G071000 Glycine max HOM05D000836 ORTHO05D000709 3.2e-06 57.4 221 23.5
vmacro06124 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 4.2e-06 57.0 38 71.1
RcHm_v2.0_Chr4g0404071 Rosa chinensis HOM05D005766 ORTHO05D007002 5.5e-06 56.6 34 79.4
Thecc.03G126600 Theobroma cacao HOM05D002332 ORTHO05D002509 5.5e-06 56.6 248 22.6
Haze_18030 Corylus avellana HOM05D002332 ORTHO05D002509 7.2e-06 56.2 165 23.6
MD15G1103400 Malus domestica HOM05D000836 ORTHO05D000709 7.2e-06 56.2 276 22.1
Medtr1g034785 Medicago truncatula HOM05D002332 ORTHO05D002509 7.2e-06 56.2 258 20.9
TPR.G22366 Trifolium pratense HOM05D002332 ORTHO05D002509 9.3e-06 55.8 165 24.2


User provided reference genes

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