Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2936 Acer truncatum HOM05D005464 ORTHO05D006803 7.2e-122 440.7 231 100.0
Atru.chr1.2934 Acer truncatum HOM05D005464 ORTHO05D006803 1.6e-113 412.9 229 94.8
TWI12G0099 Tripterygium wilfordii HOM05D005464 ORTHO05D006803 1.2e-76 290.4 226 66.4
COL.COLO4_11947 Corchorus olitorius HOM05D005464 ORTHO05D006803 5.6e-74 281.6 224 66.1
Thecc.06G025100 Theobroma cacao HOM05D000467 ORTHO05D000379 7.3e-74 281.2 229 63.8
Manes.11G057000 Manihot esculenta HOM05D005464 ORTHO05D006803 4.0e-72 275.4 229 63.8
MD17G1212300 Malus domestica HOM05D005464 ORTHO05D006803 6.8e-72 274.6 231 62.8
Prupe.3G087600 Prunus persica HOM05D005464 ORTHO05D006803 3.4e-71 272.3 231 62.8
RcHm_v2.0_Chr2g0135251 Rosa chinensis HOM05D005464 ORTHO05D006803 4.4e-71 271.9 228 62.3
Duzib160G0683 Durio zibethinus HOM05D005464 ORTHO05D006803 4.9e-70 268.5 224 64.3
CANSAT56G0380 Cannabis sativa HOM05D005464 ORTHO05D006803 1.1e-69 267.3 224 63.4
Lj3g0027830 Lotus japonicus HOM05D005464 ORTHO05D006803 1.9e-69 266.5 226 62.8
Lalb_Chr14g0373811 Lupinus albus HOM05D005464 ORTHO05D006803 4.1e-69 265.4 226 60.6
Gohir.A05G123300 Gossypium hirsutum HOM05D005464 ORTHO05D006803 9.2e-69 264.2 229 61.1
Gorai.009G128200 Gossypium raimondii HOM05D005464 ORTHO05D006803 4.6e-68 261.9 223 62.3
Gohir.D05G124200 Gossypium hirsutum HOM05D005464 ORTHO05D006803 7.8e-68 261.2 229 60.7
QL05p029765 Quercus lobata HOM05D005464 ORTHO05D006803 1.3e-67 260.4 229 61.1
QL05p030112 Quercus lobata HOM05D005464 ORTHO05D006803 1.3e-67 260.4 229 61.1
TPR.G37199 Trifolium pratense HOM05D005464 ORTHO05D006803 1.3e-67 260.4 245 56.3
VMungo1080G0510 Vigna mungo HOM05D005464 ORTHO05D006803 3.0e-67 259.2 227 61.7
Dinv30606 Davidia involucrata HOM05D005464 ORTHO05D006803 3.9e-67 258.8 223 62.3
FAN05G5161 Fragaria x ananassa HOM05D005464 ORTHO05D006803 5.0e-67 258.5 227 59.5
Medtr2g103910 Medicago truncatula HOM05D005464 ORTHO05D006803 1.1e-66 257.3 228 57.9
Phvul.005G178300 Phaseolus vulgaris HOM05D005464 ORTHO05D006803 1.9e-66 256.5 227 60.8
Eucgr.J03066 Eucalyptus grandis HOM05D005464 ORTHO05D006803 2.5e-66 256.1 222 61.7
FAN14G5059 Fragaria x ananassa HOM05D005464 ORTHO05D006803 3.3e-66 255.8 227 59.5
FvH4_6g29660 Fragaria vesca HOM05D005464 ORTHO05D006803 4.3e-66 255.4 227 59.5
Glyma.13G365800 Glycine max HOM05D005464 ORTHO05D006803 4.3e-66 255.4 229 58.5
FAN09G2673 Fragaria x ananassa HOM05D005464 ORTHO05D006803 5.6e-66 255.0 227 59.0
Glyma.15G007300 Glycine max HOM05D005464 ORTHO05D006803 7.3e-66 254.6 228 60.1
arahy.Tifrunner.gnm1.ann1.JVJR89 Arachis hypogaea HOM05D005464 ORTHO05D006803 9.5e-66 254.2 231 58.0
arahy.Tifrunner.gnm1.ann1.Y6ZEHB Arachis hypogaea HOM05D005464 ORTHO05D006803 9.5e-66 254.2 231 58.0
Cfa001959 Carpinus fangiana HOM05D005464 ORTHO05D006803 2.1e-65 253.1 229 59.4
Psat5g302720 Pisum sativum HOM05D005464 ORTHO05D006803 3.6e-65 252.3 230 57.4
GSVIVG01017342001 Vitis vinifera HOM05D005464 ORTHO05D006803 6.2e-65 251.5 228 58.3
Ca_01055_v3 Cicer arietinum L. HOM05D005464 ORTHO05D006803 1.8e-64 250.0 226 56.6
Lalb_Chr22g0350841 Lupinus albus HOM05D005464 ORTHO05D006803 6.8e-64 248.1 220 59.5
Haze_16562 Corylus avellana HOM05D005464 ORTHO05D006803 1.2e-63 247.3 240 54.6
DCAR_021346 Daucus carota HOM05D005464 ORTHO05D006803 5.8e-63 245.0 228 56.1
Eucgr.F03878 Eucalyptus grandis HOM05D005464 ORTHO05D006803 2.9e-62 242.7 224 58.0
Actinidia15983 Actinidia chinensis HOM05D005464 ORTHO05D006803 4.9e-62 241.9 223 57.4
PGR031G2541 Punica granatum HOM05D005464 ORTHO05D006803 7.0e-61 238.0 231 57.1
Sed0012798 Sechium edule HOM05D005464 ORTHO05D006803 7.0e-61 238.0 232 56.9
PSO017G6540 Papaver somniferum HOM05D005464 ORTHO05D006803 1.2e-60 237.3 225 55.1
PSO170G0224 Papaver somniferum HOM05D005464 ORTHO05D006803 2.7e-60 236.1 227 54.6
Nn2g12091 Nelumbo nucifera HOM05D000467 ORTHO05D000379 1.7e-59 233.4 225 57.8
Rhsim12G0191100 Rhododendron simsii HOM05D005464 ORTHO05D006803 1.7e-59 233.4 221 56.1
MSTRG.22747 Avicennia marina HOM05D005464 ORTHO05D006803 3.9e-59 232.3 225 56.0
Oeu045134.1 Olea europaea HOM05D005464 ORTHO05D006803 3.9e-59 232.3 226 56.2
Nn8g39510 Nelumbo nucifera HOM05D005464 ORTHO05D006803 5.1e-59 231.9 225 57.8
CiPaw.02G157400 Carya illinoinensis HOM05D005464 ORTHO05D006803 5.6e-58 228.4 205 61.0
Lj9P500T36 Lonicera japonica HOM05D005464 ORTHO05D006803 1.6e-57 226.9 233 54.5
THA.LOC104812509 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 2.1e-57 226.5 224 53.1
PGR102G0885 Punica granatum HOM05D005464 ORTHO05D006803 4.7e-57 225.3 227 52.0
ClCG07G012450 Citrullus lanatus HOM05D005464 ORTHO05D006803 6.2e-57 224.9 230 54.3
Thhalv10019455m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 1.1e-56 224.2 229 52.8
Aqoxy7G02293 Aquilegia oxysepala HOM05D005464 ORTHO05D006803 1.4e-56 223.8 225 53.8
MELO3C017863.2 Cucumis melo HOM05D005464 ORTHO05D006803 1.4e-56 223.8 226 56.2
THA.LOC104812511 Tarenaya hassleriana HOM05D005464 ORTHO05D006803 1.8e-56 223.4 223 56.1
Cpa.g.sc10.270 Carica papaya HOM05D005464 ORTHO05D006803 2.3e-56 223.0 225 55.6
Sp5g35710 Schrenkiella parvula HOM05D005464 ORTHO05D006803 3.1e-56 222.6 224 54.0
AT1G15330 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 6.8e-56 221.5 225 54.7
Migut.I00762 Erythranthe guttata HOM05D005464 ORTHO05D006803 6.8e-56 221.5 226 53.1
SHI11227 Sapria himalayana HOM05D005464 ORTHO05D006803 1.2e-55 220.7 225 55.1
Lsat_1_v5_gn_4_89921 Lactuca sativa HOM05D005464 ORTHO05D006803 2.6e-55 219.5 223 53.8
CARHR074410 Cardamine hirsuta HOM05D005464 ORTHO05D006803 3.4e-55 219.2 224 54.0
ECA232G3027 Erigeron canadensis HOM05D005464 ORTHO05D006803 4.4e-55 218.8 224 53.6
Carub.0001s1508 Capsella rubella HOM05D005464 ORTHO05D006803 5.8e-55 218.4 226 54.4
EL10Ac9g21898 Beta vulgaris HOM05D005464 ORTHO05D006803 1.3e-54 217.2 227 52.9
SGA_v2.0_scaffold5G02698 Striga asiatica HOM05D005464 ORTHO05D006803 1.3e-54 217.2 225 52.9
Peaxi162Scf00207g00638 Petunia axillaris HOM05D005464 ORTHO05D006803 2.9e-54 216.1 222 53.2
AL1G27420 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 3.7e-54 215.7 225 54.2
AT1G80090 Arabidopsis thaliana HOM05D005464 ORTHO05D006803 4.9e-54 215.3 224 53.1
CARHR015860 Cardamine hirsuta HOM05D005464 ORTHO05D006803 6.4e-54 214.9 226 53.1
C05p13460 Brassica napus HOM05D005464 ORTHO05D006803 8.3e-54 214.5 226 53.1
BolC5t30083H Brassica oleracea HOM05D005464 ORTHO05D006803 8.3e-54 214.5 226 53.1
Nitab4.5_0000373g0080 Nicotiana tabacum HOM05D005464 ORTHO05D006803 8.3e-54 214.5 227 52.0
CAN.G1503.8 Capsicum annuum HOM05D005464 ORTHO05D006803 1.1e-53 214.2 227 52.0
HanXRQChr16g0500301 Helianthus annuus HOM05D005464 ORTHO05D006803 1.1e-53 214.2 223 54.3
A06p11340 Brassica napus HOM05D005464 ORTHO05D006803 1.4e-53 213.8 226 53.1
BraA06t24313Z Brassica rapa HOM05D005464 ORTHO05D006803 1.4e-53 213.8 226 53.1
Thhalv10008048m.g Eutrema salsugineum HOM05D005464 ORTHO05D006803 1.4e-53 213.8 226 54.4
BcaC05g25470 Brassica carinata HOM05D005464 ORTHO05D006803 2.4e-53 213.0 225 53.8
CsaV3_4G001710 Cucumis sativus L. HOM05D005464 ORTHO05D006803 3.2e-53 212.6 230 53.0
A07p45420 Brassica napus HOM05D005464 ORTHO05D006803 4.1e-53 212.2 222 53.2
Aa31LG7G100 Aethionema arabicum HOM05D005464 ORTHO05D006803 5.4e-53 211.8 226 53.5
Sp1g13650 Schrenkiella parvula HOM05D005464 ORTHO05D006803 5.4e-53 211.8 226 54.4
BcaB02g08721 Brassica carinata HOM05D005464 ORTHO05D006803 1.6e-52 210.3 223 53.4
BcaC08g47570 Brassica carinata HOM05D005464 ORTHO05D006803 2.1e-52 209.9 222 53.2
C06p54250 Brassica napus HOM05D005464 ORTHO05D006803 2.1e-52 209.9 222 53.2
BolC6t40438H Brassica oleracea HOM05D005464 ORTHO05D006803 2.1e-52 209.9 222 53.2
Nitab4.5_0006769g0010 Nicotiana tabacum HOM05D005464 ORTHO05D006803 2.7e-52 209.5 227 51.5
Carub.0002s2743 Capsella rubella HOM05D005464 ORTHO05D006803 2.3e-51 206.5 224 52.2
Sc06g0005910 Simmondsia chinensis HOM05D005464 ORTHO05D006803 2.3e-51 206.5 214 50.5
unitig_0.g1114 Utricularia gibba HOM05D005464 ORTHO05D006803 3.9e-51 205.7 224 50.0
Solyc06g068160.3 Solanum lycopersicum HOM05D005464 ORTHO05D006803 8.6e-51 204.5 229 50.2
PGSC0003DMG400028509 Solanum tuberosum HOM05D005464 ORTHO05D006803 8.6e-51 204.5 227 49.8
AUR62011516 Chenopodium quinoa HOM05D005464 ORTHO05D006803 3.3e-50 202.6 226 48.7
MBI14_g16402_MAGBIO Magnolia biondii HOM05D005464 ORTHO05D006803 3.3e-50 202.6 227 52.0
Sopen06g025430 Solanum pennellii HOM05D005464 ORTHO05D006803 4.3e-50 202.2 229 49.8
Hund06557 Selenicereus undatus HOM05D005464 ORTHO05D006803 5.6e-50 201.8 224 48.7
AUR62016335 Chenopodium quinoa HOM05D005464 ORTHO05D006803 3.6e-49 199.1 226 47.3
BraA07t32046Z Brassica rapa HOM05D005464 ORTHO05D006803 1.3e-46 190.7 220 50.0
Aa31LG4G370 Aethionema arabicum HOM05D005464 ORTHO05D006803 2.2e-46 189.9 225 48.0
VMungo1127G1748 Vigna mungo HOM05D005464 ORTHO05D006803 2.2e-46 189.9 202 53.5
vmacro16896 Vaccinium macrocarpon HOM05D005464 ORTHO05D006803 3.8e-46 189.1 229 49.3
ATR0800G035 Amborella trichopoda HOM05D005464 ORTHO05D006803 1.9e-42 176.8 227 45.8
Zm00001eb232620 Zea mays HOM05D005464 ORTHO05D006803 3.3e-42 176.0 259 43.2
HPP92_010901 Vanilla planifolia HOM05D005464 ORTHO05D006803 7.3e-42 174.9 220 44.1
Os02g0158900 Oryza sativa ssp. japonica HOM05D005464 ORTHO05D006803 1.2e-41 174.1 238 42.0
Cc04_g04410 Coffea canephora HOM05D005464 ORTHO05D006803 1.1e-40 171.0 194 50.0
BcaC05g25495 Brassica carinata HOM05D005464 ORTHO05D006803 1.9e-37 160.2 184 48.9
HPP92_016981 Vanilla planifolia HOM05D005464 ORTHO05D006803 1.9e-37 160.2 230 39.1
Pp3c13_16980 Physcomitrium patens HOM05D005464 ORTHO05D006803 7.1e-37 158.3 223 41.7
Ciclev10026304m.g Citrus clementina HOM05D005464 ORTHO05D006803 1.1e-34 151.0 106 74.5
SMO201G0050 Selaginella moellendorffii HOM05D005464 ORTHO05D006803 1.9e-34 150.2 228 39.5
Mapoly0007s0086 Marchantia polymorpha HOM05D005464 ORTHO05D006803 1.6e-33 147.1 220 37.3
Pp3c3_23830 Physcomitrium patens HOM05D005464 ORTHO05D006803 2.1e-33 146.7 219 41.1
Psat6g000160 Pisum sativum HOM05D005464 ORTHO05D006803 1.2e-28 131.0 134 53.7
PGR102G1999 Punica granatum HOM05D005464 ORTHO05D006803 4.3e-26 122.5 217 37.3
AL2G41440 Arabidopsis lyrata HOM05D005464 ORTHO05D006803 1.2e-23 114.4 138 47.8
TAR383G0332 Trochodendron aralioides HOM05D005464 ORTHO05D006803 2.6e-23 113.2 115 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1642 Anthoceros agrestis HOM05D005464 ORTHO05D006803 8.7e-19 98.2 210 32.4
Hma1.2p1_1144F.1_g261310 Hydrangea macrophylla HOM05D005464 ORTHO05D006803 1.3e-17 94.4 95 53.7
CBR_g38673 Chara braunii HOM05D005464 ORTHO05D006803 1.0e-14 84.7 259 29.0
SEGI_39315 Sequoiadendron giganteum HOM05D005464 ORTHO05D006803 1.1e-13 81.3 109 44.0
SEGI_27934 Sequoiadendron giganteum HOM05D005464 ORTHO05D006803 7.9e-12 75.1 235 27.7
Medtr2g103890 Medicago truncatula HOM05D005464 ORTHO05D006803 8.7e-11 71.6 112 43.8
CBR_g24374 Chara braunii HOM05D005464 ORTHO05D006803 1.9e-10 70.5 290 25.2
Nn1g00750 Nelumbo nucifera HOM05D005464 ORTHO05D006803 8.2e-09 65.1 109 40.4
AagrBONN_evm.TU.Sc2ySwM_344.2189 Anthoceros agrestis HOM05D005464 ORTHO05D006803 5.0e-06 55.8 91 37.4


User provided reference genes

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