Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 5.6e-75 284.3 151 100.0
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 4.5e-32 141.7 135 57.8
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 1.7e-31 139.8 137 59.1
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.2e-31 139.4 140 57.1
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.2e-31 139.4 135 57.0
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 3.8e-31 138.7 150 59.3
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 4.6e-29 131.7 135 56.3
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 2.2e-26 122.9 137 54.7
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 1.3e-23 113.6 146 48.6
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 3.8e-23 112.1 135 51.1
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 1.4e-22 110.2 118 56.8
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.9e-22 109.8 163 42.9
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 1.9e-22 109.8 130 50.0
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.9e-22 109.8 129 49.6
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.5e-22 109.4 130 48.5
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.5e-22 109.4 130 50.0
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 9.4e-22 107.5 118 54.2
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.6e-21 106.7 131 50.4
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 4.7e-21 105.1 144 52.8
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 6.1e-21 104.8 144 47.2
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 7.9e-21 104.4 105 58.1
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 1.4e-20 103.6 145 45.5
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 1.4e-20 103.6 145 45.5
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 1.8e-20 103.2 143 49.0
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 3.0e-20 102.4 138 46.4
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 3.0e-20 102.4 144 45.1
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 3.9e-20 102.1 138 44.2
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 5.2e-20 101.7 128 46.1
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 5.2e-20 101.7 80 67.5
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 6.7e-20 101.3 131 48.1
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 8.8e-20 100.9 154 44.2
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 8.8e-20 100.9 131 49.6
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 1.5e-19 100.1 145 44.1
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 1.5e-19 100.1 145 44.1
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 1.5e-19 100.1 145 44.1
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.5e-19 100.1 115 49.6
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 2.0e-19 99.8 121 47.1
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 2.6e-19 99.4 142 47.9
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 2.6e-19 99.4 104 60.6
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 3.3e-19 99.0 136 46.3
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 4.4e-19 98.6 114 50.9
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 5.7e-19 98.2 159 45.3
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 7.4e-19 97.8 114 49.1
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 7.4e-19 97.8 89 60.7
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 9.7e-19 97.4 123 46.3
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 9.7e-19 97.4 151 47.7
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 1.7e-18 96.7 97 58.8
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.2e-18 96.3 144 42.4
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 4.8e-18 95.1 156 46.2
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 8.2e-18 94.4 117 51.3
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 8.2e-18 94.4 145 44.8
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 1.1e-17 94.0 116 47.4
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.8e-17 93.2 106 50.9
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 3.1e-17 92.4 63 74.6
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.3e-17 91.7 61 73.8
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 9.1e-17 90.9 112 50.9
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 9.1e-17 90.9 76 64.5
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.2e-16 90.5 113 50.4
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.6e-16 90.1 65 69.2
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 2.0e-16 89.7 106 49.1
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 2.6e-16 89.4 73 58.9
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 4.5e-16 88.6 108 50.0
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 5.9e-16 88.2 143 44.8
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 5.9e-16 88.2 104 51.0
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 1.0e-15 87.4 84 50.0
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 1.0e-15 87.4 145 42.8
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 1.7e-15 86.7 78 59.0
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 2.2e-15 86.3 144 43.1
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 3.8e-15 85.5 127 44.9
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 8.5e-15 84.3 111 45.9
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 8.5e-15 84.3 111 46.8
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 1.1e-14 84.0 149 43.0
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 1.1e-14 84.0 137 42.3
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 1.1e-14 84.0 75 61.3
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 1.5e-14 83.6 78 57.7
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 1.9e-14 83.2 76 61.8
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 3.2e-14 82.4 117 48.7
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 3.2e-14 82.4 117 48.7
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 3.2e-14 82.4 57 70.2
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 7.2e-14 81.3 57 68.4
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 9.4e-14 80.9 55 76.4
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 9.4e-14 80.9 138 44.9
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 1.2e-13 80.5 128 38.3
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 3.6e-13 79.0 92 52.2
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 4.7e-13 78.6 72 59.7
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 8.0e-13 77.8 64 59.4
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 8.0e-13 77.8 59 67.8
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 1.0e-12 77.4 90 48.9
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 2.3e-12 76.3 137 41.6
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 2.3e-12 76.3 67 61.2
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 4.0e-12 75.5 113 42.5
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 3.3e-11 72.4 106 43.4
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 3.3e-11 72.4 109 43.1
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 4.4e-11 72.0 46 69.6
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.3e-10 70.5 46 73.9
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 4.8e-10 68.6 60 60.0
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 2.7e-08 62.8 58 56.9
Pp3c10_2350 Physcomitrium patens HOM05D007527 ORTHO05D009523 9.4e-06 54.3 64 45.3


User provided reference genes

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