Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.0e-117 426.8 222 100.0
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 6.3e-91 337.8 227 82.4
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 4.2e-87 325.1 214 79.0
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 1.4e-85 320.1 216 78.2
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.5e-84 316.6 225 76.9
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 2.6e-84 315.8 225 77.8
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 1.7e-83 313.2 224 77.7
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 2.2e-83 312.8 227 76.2
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 2.8e-83 312.4 232 74.1
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 8.2e-83 310.8 219 75.8
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 8.2e-83 310.8 225 74.7
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 5.3e-82 308.1 223 75.3
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 9.1e-82 307.4 214 79.0
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 2.6e-81 305.8 221 75.1
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.2e-80 302.8 226 73.9
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 2.2e-80 302.8 219 75.3
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.8e-80 302.0 218 73.4
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 3.8e-80 302.0 221 76.0
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 5.0e-80 301.6 223 72.6
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 5.0e-80 301.6 231 72.3
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 1.1e-79 300.4 189 83.6
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.2e-79 298.5 229 72.9
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 7.2e-79 297.7 229 72.5
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 2.1e-78 296.2 225 74.2
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 3.6e-78 295.4 229 72.1
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.6e-78 295.4 216 74.1
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.6e-78 295.4 216 74.1
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 3.6e-78 295.4 225 72.9
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.6e-78 295.4 219 74.4
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 8.0e-78 294.3 216 73.6
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.0e-77 293.9 216 73.6
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.8e-77 293.1 197 78.2
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 2.3e-77 292.7 197 78.2
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 5.2e-77 291.6 218 73.4
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.7e-77 291.2 197 77.7
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 1.5e-76 290.0 230 68.7
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.5e-76 290.0 222 72.5
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 1.5e-76 290.0 215 73.0
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 3.3e-76 288.9 223 69.1
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 3.3e-76 288.9 216 72.7
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 3.3e-76 288.9 227 69.6
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 3.3e-76 288.9 227 69.6
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 3.3e-76 288.9 227 70.5
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 5.7e-76 288.1 219 70.8
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 1.3e-75 287.0 222 68.9
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.7e-75 286.6 215 71.2
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 1.7e-75 286.6 219 70.3
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.7e-75 286.6 219 72.1
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.7e-75 286.6 226 71.2
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 2.8e-75 285.8 199 76.4
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 3.7e-75 285.4 226 71.2
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 4.8e-75 285.0 185 78.4
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 6.3e-75 284.6 224 70.5
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.8e-74 283.1 223 69.1
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 3.1e-74 282.3 201 73.6
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 5.3e-74 281.6 223 70.4
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 2.7e-73 279.3 222 71.2
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 2.7e-73 279.3 220 68.2
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 3.5e-73 278.9 172 83.7
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.7e-72 276.6 217 69.1
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 5.0e-72 275.0 223 69.5
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.1e-71 273.9 223 65.9
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 1.5e-71 273.5 206 70.9
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 2.1e-70 269.6 218 65.6
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 1.0e-69 267.3 216 71.3
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 1.8e-69 266.5 224 64.7
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 1.2e-68 263.8 225 64.4
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.6e-68 262.7 216 68.1
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.6e-68 262.7 206 69.9
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 4.4e-68 261.9 183 75.4
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 5.7e-68 261.5 220 65.9
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.7e-67 260.0 185 70.3
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 4.8e-67 258.5 217 66.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 8.3e-67 257.7 218 63.8
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.4e-66 256.1 208 66.3
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 2.4e-66 256.1 221 62.9
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.1e-66 255.8 178 73.6
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 4.1e-66 255.4 218 63.3
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 5.4e-66 255.0 203 70.9
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 9.1e-66 254.2 196 70.4
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.2e-65 253.8 237 60.8
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.2e-65 253.8 237 60.8
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 2.7e-65 252.7 223 63.2
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 2.7e-65 252.7 193 67.9
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 5.9e-65 251.5 196 69.4
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.7e-64 250.0 208 65.9
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.2e-64 249.6 208 65.9
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 2.9e-64 249.2 211 64.5
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 3.8e-64 248.8 223 61.4
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 5.5e-63 245.0 174 71.8
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 5.5e-63 245.0 150 84.0
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 9.5e-63 244.2 229 58.5
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 9.5e-63 244.2 223 60.5
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.2e-62 243.8 192 71.4
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 4.7e-62 241.9 202 64.4
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 4.7e-62 241.9 202 64.4
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 4.7e-62 241.9 202 64.4
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 4.7e-62 241.9 208 62.5
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 6.1e-62 241.5 217 61.8
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 6.1e-62 241.5 217 61.8
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 5.2e-61 238.4 170 74.1
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.8e-61 238.0 164 77.4
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 6.8e-61 238.0 164 77.4
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 4.4e-60 235.3 171 70.2
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 7.5e-60 234.6 157 77.1
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.8e-59 232.6 223 61.9
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.4e-58 229.6 218 63.3
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 4.1e-58 228.8 157 76.4
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 9.2e-58 227.6 158 77.8
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 1.2e-57 227.3 216 58.8
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 1.0e-56 224.2 156 75.0
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 4.3e-55 218.8 157 73.2
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 5.6e-55 218.4 155 71.6
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 7.3e-55 218.0 156 73.7
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 4.7e-54 215.3 157 70.1
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.8e-53 213.4 156 71.2
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 2.3e-53 213.0 157 69.4
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 5.2e-53 211.8 191 59.2
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 8.9e-53 211.1 155 68.4
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 3.4e-52 209.1 181 62.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 4.4e-52 208.8 184 63.0
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 4.4e-52 208.8 156 73.1
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 5.7e-52 208.4 137 81.0
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 9.8e-52 207.6 167 64.1
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 3.7e-51 205.7 146 74.7
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 3.2e-50 202.6 172 63.4
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 7.0e-50 201.4 147 71.4
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.6e-49 198.7 144 77.8
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 4.6e-49 198.7 187 61.5
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 4.6e-49 198.7 187 61.5
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 3.9e-48 195.7 216 50.0
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.5e-47 193.0 136 73.5
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 2.5e-47 193.0 183 55.7
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 2.5e-47 193.0 203 50.2
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 2.8e-46 189.5 212 49.5
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 3.1e-45 186.0 125 78.4
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.2e-45 185.3 118 83.1
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 2.3e-40 169.9 137 65.7
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 9.5e-39 164.5 105 81.9
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.8e-38 162.9 105 81.0
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 4.0e-37 159.1 214 47.2
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 2.6e-36 156.4 214 46.7
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 2.2e-35 153.3 204 47.1
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.1e-34 151.0 157 51.0
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 4.6e-33 145.6 108 72.2
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 7.6e-28 128.3 87 71.3
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 7.6e-20 101.7 185 40.0
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 2.4e-18 96.7 202 33.7
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 8.1e-14 81.6 107 48.6
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 8.1e-14 81.6 107 48.6
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 7.1e-10 68.6 75 48.0


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